Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0988 ATGGGGAAATCCCCTGGAAAATGGATCAAAGGGCTACTGTTTGGGAAGAAATCATCCAAATCTAATTTGTCAAAGGGAAGAGAAATTTCAAAACATGCAAGCAAGGGAGATGCATTAGTTTGTGCTAAGGTACCAGCATCTGATTTGACTGTTGATGCTCCCTTGACTTCACTCCCTGTTCCTCTCACCACTGCTAGAAATGGAGTAGTCTCAGACTCAGAAAAGGGAACAGCTTCTAGATTACCAAATGATGGAGTTATTTTATCATCTTCAAAGGAAAATGGGGATACAGAAACAATCATGAATTTGGGTTTATCAAAAGATCCTGAAAGAATCAGACATGAACAAGCTGCAACAAAGGCACAAGCTGCATTCAGGGGTTATTTGGCTCGACGAGCATTTCGAACCCTTAAGGGCATCATAAGGCTTCAAGCACTTGGTCGCGGCCGTTTGGTTAGAAGACAAGCTATAGCCACCTTATGCTGTGTGCAGGGAATTGTTAAGTTCCAGGCGCTGGTTCGTGGCCAAAGTGTCAGACATTCTAATATCGGGACTGAAGTGCATGAAAAACTGAGTGCGAGAAAATTTCCGGATGCCAAATGTTCAAACTCGTTTGGGTTACAAACATCTAATCAGGCAGAGAAGCTGTCAAAAAATGTTTTTGTCTGTACGCTTCTTGCTTCATCACCTACATCAATGCCTCTGCACCTTCAGTATGGTCCTGGGGAGCCAAACTCAGCCTGGGATTGGCTAGAACGTTGGACGAAGTCACATTTTTGGGAACCCCTAACAAAACCCAAAAAGATTATTGACTCAAAGTCTCAGAAAAAGCGTGGCACTTCTCAAACGGTAGAAACTGATCGAAGTAGGCCAAAACGAAGTGTTCGAAAAGCAACCAGTGCAAAATTTGAAAATGGATCTACTCAGTCGACATTAGAGTCAGATAAACCTAAACGCAACCTGAGGAAAGTTTCAAGCCATCCAGTAGATTCTGTTCAGGAGCATCCAAAAAATGCAACTGAGAAGACTAAAAGTAAATTAAGAAAAAATCTGAAATCCACATCAGATGCTTCTGATCAGCTAGAGGTTAAAGCTGAGAAACCCAAGCAGAGTCTGAGGAAATCATCAAGCGCTGCCTCTGATGCCCCTGAGCAGGGCACTGGGGATTCTCTTAAAAAGATCAAGAAGGATATGGCAGTGACAGTGTCAAAACAGTCTGATATTGAGACAAGTCTGAAACCACCTGCTGAAAATGAGCTAGTTGATAATGTACATGATCATACTCTGGCTGACTTGCAATGTGTGGAAAACAATGGTAAAAGCGAGAATATTCCTGAAGCGAACAAGGACATGAGCTATAAGGATAATGATATTAGCAATGATGACCAGAAAACCAGCCAGAGAAGAGCTTCTTTACCTGGAAAGCATGATTATCAAGAGAATGGGTTACATAACACACCAAGACTGCCTAGCTATATGGCAGCAACTGAATCTGCGAAGGCCAAACTGAGAGCATTAAGCTCCCCGAGGTTTGGCCAAGATGAGGCTGATAAGAATGGTATCACCAGACGGCATTCTCTACCATCATCTTCTACCAATGGCAAGTTGAGTTCATGGTCACCACGAGCGCAAAGACTGGTCCAAGCAAGTGGCAAAGGAGTGTTCAGAAGTGACAGATCTTTAATGTCTTCTAGAGACGGTAGTGAGAAGTTGCTGCAACCAGAGTGGAGGAGGTGA 1737 0.4324 MGKSPGKWIKGLLFGKKSSKSNLSKGREISKHASKGDALVCAKVPASDLTVDAPLTSLPVPLTTARNGVVSDSEKGTASRLPNDGVILSSSKENGDTETIMNLGLSKDPERIRHEQAATKAQAAFRGYLARRAFRTLKGIIRLQALGRGRLVRRQAIATLCCVQGIVKFQALVRGQSVRHSNIGTEVHEKLSARKFPDAKCSNSFGLQTSNQAEKLSKNVFVCTLLASSPTSMPLHLQYGPGEPNSAWDWLERWTKSHFWEPLTKPKKIIDSKSQKKRGTSQTVETDRSRPKRSVRKATSAKFENGSTQSTLESDKPKRNLRKVSSHPVDSVQEHPKNATEKTKSKLRKNLKSTSDASDQLEVKAEKPKQSLRKSSSAASDAPEQGTGDSLKKIKKDMAVTVSKQSDIETSLKPPAENELVDNVHDHTLADLQCVENNGKSENIPEANKDMSYKDNDISNDDQKTSQRRASLPGKHDYQENGLHNTPRLPSYMAATESAKAKLRALSSPRFGQDEADKNGITRRHSLPSSSTNGKLSSWSPRAQRLVQASGKGVFRSDRSLMSSRDGSEKLLQPEWRR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0988 578 SMART iq_5 113 135 IPR000048 GO:0005515
Vvi1g0988 578 MobiDBLite consensus disorder prediction 300 314 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 388 402 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 69 92 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 433 578 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 447 475 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 523 545 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 268 299 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 562 578 - -
Vvi1g0988 578 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Vvi1g0988 578 Coils Coil 344 364 - -
Vvi1g0988 578 Pfam Protein of unknown function (DUF4005) 445 557 IPR025064 -
Vvi1g0988 578 PANTHER IQ-DOMAIN 5-RELATED 1 534 - -
Vvi1g0988 578 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Vvi1g0988 578 MobiDBLite consensus disorder prediction 268 418 - -
Vvi1g0988 578 MobiDBLite consensus disorder prediction 315 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0988 Vvi-Chr1 11028943 11033468 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0988 1 578 IQD Protein Family AT1G14380 41.408 1.96e-118 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0988 - - vvi:100267340 1125.92