Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0951 ATGTTTGAGGGTGTTGGGAAGGCATCCATTGTTGCATTCAGGTCTGGTGTTGTCATGGGTTTTCTACTTGCTGCAAACGATCTTTTGGTGCTATACATTGCTATTAATCTCTTCATGCTCTACTATAGTGATGACTGGGAAGGCCTTTTTGAGGCTGTTACTGGTTATGGACTTGGTAGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGAATCTACGCAAAGGCTGCTAATGTTGGTGTTAATCTTGTGGGAAAGGTTGAGAGGAACATTCCTAAAGATGATCTAAGAAATCTAGTTGTGATAGCAAACAATGTTGGTGATAAAGTTGGGGATATTACTGGAATGGGATCTTATTTTTTTGGCTCTATGATGAGTCATCCTATACTGCTCTTGTTGTTGCTTCCATCTCATCATTTGGTATCAATCATGATTTCACTGCTATGTGTTATCCCCTGCTTGTCAGTTCCATGGGTATTCTTGTTTGTTTGA 495 0.4061 MFEGVGKASIVAFRSGVVMGFLLAANDLLVLYIAINLFMLYYSDDWEGLFEAVTGYGLGRSSMALFGRVGGGIYAKAANVGVNLVGKVERNIPKDDLRNLVVIANNVGDKVGDITGMGSYFFGSMMSHPILLLLLLPSHHLVSIMISLLCVIPCLSVPWVFLFV* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0951 164 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 134 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi1g0951 164 Pfam Inorganic H+ pyrophosphatase 4 152 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0951 Vvi-Chr1 10386150 10386644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0951 3 124 Primary Pumps ATPases AT1G15690 78.689 6.72e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0951 K23025 - nnu:104592540 201.06