Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0946 ATGTTTGGGGTATGGAAGATTCAAGGAGTAGAGGCAAAAAAGACGGCATTGGATCAAGTACGTGAGGGATTAATGGTATTGGAGGAGGAGTTTGGGAAGTGTAGCAAATGTATGGATTTCTTCGACGGGGATCGGATTGGATACGTTGATATTGCCCTAGGGAGCTTGTTGGGGTGGGTGAATGTGATGGAGAAGATGAACGGATGTAAAGCTACTTGA 219 0.4521 MFGVWKIQGVEAKKTALDQVREGLMVLEEEFGKCSKCMDFFDGDRIGYVDIALGSLLGWVNVMEKMNGCKAT* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0946 72 SUPERFAMILY GST C-terminal domain-like 9 70 IPR036282 -
Vvi1g0946 72 Gene3D - 1 72 - -
Vvi1g0946 72 Coils Coil 10 30 - -
Vvi1g0946 72 Pfam Glutathione S-transferase, C-terminal domain 13 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0946 Vvi-Chr1 10326001 10326219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0946 8 64 Glutathione S-transferase Gene Family AT1G10360 56.140 2.67e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0946 K00799 - vvi:100250199 104.375