Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0942 ATGGCTAAGAACGATGTGAAGCTTTTGGGTGCATGGCCAAGCCCATTTGTGATGCGAGCACGCATCGCCCTCAACATCAAATCCGTCGACTATGAGTTACTCGAAGAGAAACTGGGATCCAAGACCCAACTCCTCCTTCAATCTAACCCAGTTTATAAGAAAGTGCCCGTTCTCATCCATGAGCACAAACCCATATGCGAGTCCCTCATCATTGTCCAGTACATCGACGAGGCTTGGTCCTCTGGACCCTCCATCCTCCCTTCAGACCCTTATGACCGCGCTATTGCCCGCTTCTGGGGTGTCTACATTGACGATAAGTGGTTTCCGTTGCTGGGTGGGATCGGGAAGGCTCAAGGAGAGGAGGCGAAAAAGGCGGCAGTAGATCAAGTGCATGAAGGGCTTATGCTGTTAGAGGAGGCGTTCGGGAAGTGCAGCAAAGGGAAGGATTTCTTTAGCGGGGATCGAATTGGTTACCTTGATATCGCTTTAGGGTGCTTCTTGGGGTGGGTGAGGGTGTCGGAGAAGATGAATGGCGTGAAGCTGCTTGATGAAGCCAAGATGCCTGGTCTGGCTAGCTGGGTGGAGAAGTTCTGTGCGGACAGTGCTGTGAAGGATGTGATGCCGGATACCGATAAACTTTCGGAGTTTGCTAGGATGCTAATCCAGTTCAAGGCCAACGCTCATCCGCCGGCTTCTTAA 699 0.5179 MAKNDVKLLGAWPSPFVMRARIALNIKSVDYELLEEKLGSKTQLLLQSNPVYKKVPVLIHEHKPICESLIIVQYIDEAWSSGPSILPSDPYDRAIARFWGVYIDDKWFPLLGGIGKAQGEEAKKAAVDQVHEGLMLLEEAFGKCSKGKDFFSGDRIGYLDIALGCFLGWVRVSEKMNGVKLLDEAKMPGLASWVEKFCADSAVKDVMPDTDKLSEFARMLIQFKANAHPPAS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0942 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi1g0942 232 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vvi1g0942 232 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vvi1g0942 232 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Vvi1g0942 232 Gene3D Glutaredoxin 1 85 - -
Vvi1g0942 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 214 IPR045073 -
Vvi1g0942 232 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Vvi1g0942 232 Pfam Glutathione S-transferase, C-terminal domain 121 195 - -
Vvi1g0942 232 FunFam Glutathione S-transferase U9 86 227 - -
Vvi1g0942 232 SUPERFAMILY GST C-terminal domain-like 77 222 IPR036282 -
Vvi1g0942 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Vvi1g0942 232 SFLD Glutathione Transferase (cytosolic) 2 222 IPR040079 -
Vvi1g0942 232 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vvi1g0942 232 CDD GST_N_Tau 6 79 - -
Vvi1g0942 232 Gene3D - 86 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0942 Vvi-Chr1 10300523 10301321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0942 1 221 Glutathione S-transferase Gene Family AT1G10370 65.766 3.15e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0942 K00799 - vvi:100250199 463.766