Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g0919 | ATGAATCTCACATCTTCACTAGCCGTCCTTCATCTCTTCTTCTTCTTCTTCTTCTTCTCCTCTTTCTTTGCTGTCGCTGTTGCGATTGAAGACGACGTCGTTTGTCTCCAAGGCCTCAAGGACTCTCTTACAGACCCAGATGATAAGATCAGCACTTGGAGGTTCACCAACACCTCTGCCTCCTTTATCTGCAATCTCGTCGGCGTCTCTTGCTGGAACGCGCAGGAGAGCCGCATCATCAGCCTCCAACTTCCTGATATGAACCTCATCGGTACCTTACCCGACTCCCTTCAGCACTGCCGAAGTCTCCAGAGTCTTGGTCTCTCTGGTAATCGTATCTCGGGTTCCATCCCTGACCAAATCTGTACCTGGTTGCCCTATGTCGTAACCCTAGATCTGTCCCATAACGACCTCACCGGTCCAATTCCACCGGAAATGGTTAATTGCAAGTTTTTAAACAATCTGATTCTTAACAACAATGGGTTATCGGGTATGATTCCCTACGAGATTGGCCGACTTCCTAGGCTCAAGAAGTTTTCCGTTGCCAACAATGATCTCTCCGGTTCAATACCGTCCGAGTTGTCGAAATTCGAAGACGATGCCTTCGATGGGAACAATGGACTCTGCCGTAAGCCTCTAGGAAAGTGCGGTGGACTGAGTAGTAAAAGCCTTGCCATTATTATTGCGGCGGGGATTTTTGGTGCTGCAGGTTCGTTGCTATTAGGTTTTGCGCTTTGGTGGTGGTTTTTCGTTAGGCTGAATCGGAAAAAGAGAGGCTACAGTGGTGGTGATAGTGGCAAGATTGGTGGTAGTTGGGCGGAGCGGTTGCGGATGCACAAACTGGTTCAGGTGTCGCTGTTCCAGAAACCCATTGTAAAGATCAAGTTAGCCGATTTGATGGCGGCTACTAATAATTTTGACCCTGAATATCTTCTTTGTTCTACAAGAACAGGGGTTTCCTATAAGGCTGTGTTGCTGGATGGATCTGCTTTGGCTATCAAACGTCTCAGTGCCTGTAAGCTCAGTGACAAGCAGTTTCGGTCTGAAATGAATAGGTTGGGGCAGCTTAGACACCCCAATTTGGTTCCCTTATTGGGTTTTTGTGCCGTAGAAGAAGAGAAACTTTTAGTGTATAAGCACATGCCTAATGGGACCCTGTATTCTCTTTTGCATGGGAGTACTAGTTTTCATTCACAGCACCACTCGATTGATTGGCCTACTAGGCTTAGGATTGGTGTAGGTGCTGCTAGAGGGCTTGCCTGGCTTCACCACGGTTGTCAACCCCCATACATGCACCAGAACATTAGTTCCAGTGTGATTCTTCTTGATGATGATTATGATGCTCGGATAACGGATTTTGGGTTAGCAAGGCTTGTGGCTTCTGCTGACTCTAATGATAGTTCTTTTGTTAATGGGGACCTTGGAGAATTTGGTTATGTGGCTCCAGAGTACTCGAGCACTATGGTCCCTTCACTAAAGGGCGATGTTTATGGTTTTGGGGTTGTGCTTCTTGAGCTGGTGACTGGGCAGAAGCCTCTGGAGGTTAATAATGGAGATGAAGGTTTTAAAGGGAACCTGGTGGATTGGGTTATTCAGTTGCTGATATCTGGTAGAAGCAAGGATGCAATTGATAAGGATTTGTGGGGGAAAGGTTATGATGATGAAATTGTGCAGCTCATGAGGGTTGCTTGTAGTTGTGTTGGTTCTAGGCCCAAGGAAAGGCCTTCTATGTACAATGTTTACCAGTCATTGAAGAGCATGGCAGAGAAACATGGTTTCTCAGAGCAGTATGATGAATTTCCATTGATGTTTAGCAAGCAGGATCCTGACTATTAG | 1836 | 0.4646 | MNLTSSLAVLHLFFFFFFFSSFFAVAVAIEDDVVCLQGLKDSLTDPDDKISTWRFTNTSASFICNLVGVSCWNAQESRIISLQLPDMNLIGTLPDSLQHCRSLQSLGLSGNRISGSIPDQICTWLPYVVTLDLSHNDLTGPIPPEMVNCKFLNNLILNNNGLSGMIPYEIGRLPRLKKFSVANNDLSGSIPSELSKFEDDAFDGNNGLCRKPLGKCGGLSSKSLAIIIAAGIFGAAGSLLLGFALWWWFFVRLNRKKRGYSGGDSGKIGGSWAERLRMHKLVQVSLFQKPIVKIKLADLMAATNNFDPEYLLCSTRTGVSYKAVLLDGSALAIKRLSACKLSDKQFRSEMNRLGQLRHPNLVPLLGFCAVEEEKLLVYKHMPNGTLYSLLHGSTSFHSQHHSIDWPTRLRIGVGAARGLAWLHHGCQPPYMHQNISSSVILLDDDYDARITDFGLARLVASADSNDSSFVNGDLGEFGYVAPEYSSTMVPSLKGDVYGFGVVLLELVTGQKPLEVNNGDEGFKGNLVDWVIQLLISGRSKDAIDKDLWGKGYDDEIVQLMRVACSCVGSRPKERPSMYNVYQSLKSMAEKHGFSEQYDEFPLMFSKQDPDY* | 612 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g0919 | 611 | ProSiteProfiles | Protein kinase domain profile. | 306 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi1g0919 | 611 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 380 | - | - | |
Vvi1g0919 | 611 | Pfam | Leucine rich repeat N-terminal domain | 30 | 72 | IPR013210 | - | |
Vvi1g0919 | 611 | SUPERFAMILY | L domain-like | 28 | 198 | - | - | |
Vvi1g0919 | 611 | Gene3D | Ribonuclease Inhibitor | 29 | 217 | IPR032675 | - | |
Vvi1g0919 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 607 | - | - | |
Vvi1g0919 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 267 | 380 | - | - | |
Vvi1g0919 | 611 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 69 | 586 | - | - | |
Vvi1g0919 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 29 | 217 | - | - | |
Vvi1g0919 | 611 | Pfam | Protein tyrosine and serine/threonine kinase | 330 | 584 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi1g0919 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 381 | 606 | - | - | |
Vvi1g0919 | 611 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 584 | IPR011009 | - | |
Vvi1g0919 | 611 | CDD | STKc_IRAK | 314 | 587 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi1g0919 | Vvi-Chr1 | 10044523 | 10046358 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi1g0919 | 13 | 608 | Receptor kinase-like Gene Family | AT1G27190 | 67.169 | 0.0 | 796 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Vvi1g0919 | PK_Tyr_Ser-Thr | 2.1e-29 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g0919 | - | - | vvi:100262086 | 1176 |