Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0870 ATGGTGACCAGGATGGAAAATCTAGACTTGAGAGTCCGCAGTAGTCGCGCCAAATCTATTGGCACCATAATGTCCATCACAGGAGCACTCACTATGACGATGTATGAAGGTCCTCCAGTTGCGTTCACCTCATTAACTTCTACCAAACTCAATGGAAATGTTACGTTGCCACAATCAAACTGGGTTATAGGAGGTATTCTCTCTGCAATTGCTGCCTTCATGCTTGCAGTTTTGTTTGTTTTCCAGACCTCCATTATTAGAGCCTACCCTGCAGAGCTGATGGTAACACTCATTTGTTGCACCTTCGTGGCCATGCAATCTTCCATAGTCTCTCTGATGGCAGAAAGGAATCCAAGCGCTTGGAGATTAAGACCAGACATAGAGTTGATAGCTATTGTATACTCAGTGATTCTTGTAGTTGGACTTCGAAGTGTTGCTTCTGCATGGGTAATGCGCAGAAAGGGGCCTTTCTTTGCAGCCATGTTTAAGCCAGTTGGGATCATAATTGCAGTTGTGATGGGGGTCACTTTTCTTGGAGATACTCTCTATCTTGGAAGTGTGGTTGGAGCTGCTATAATAGCTATTGGGTTTTATACAGTGATGTGGGGGAAGGATAAAGAGGAGACGCTACTTGAAGACGTCCCAGCCCATGGCATGGAATCATCCTCCCACAACGTCCCTCTTTTGCAAAACAAAACTTTCCAGGCTTAG 711 0.4515 MVTRMENLDLRVRSSRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFMLAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVYSVILVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIAIGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKTFQA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0870 236 PANTHER WAT1-RELATED PROTEIN 5 219 IPR030184 GO:0016020|GO:0022857
Vvi1g0870 236 Pfam EamA-like transporter family 64 201 IPR000620 GO:0016020
Vvi1g0870 236 SUPERFAMILY Multidrug resistance efflux transporter EmrE 123 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0870 Vvi-Chr1 9284609 9285629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0870 1 210 Nodulin-like Gene Family AT5G40240 42.326 4.33e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0870 - - vvi:100253486 453.751