Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0868 ATGGAAAAGCTAGACTTGAAAGTCAAAAGCAGTCGTGCCAAATGTCTTGGAACCCTAGTATCAGTAGCAGGGGCACTCCTTATAACTATATACAAAGGCCCCGGAATTGAATTTGCTTCAACTACTCCTTCCATGCTTAACCACAATCTTCTGCTGCCCCGATCAAACTGGATCATTGGAGGCTTTCTCACTGCAGCTGCTGCCTTCATGGTCGCAGTGTTGCTTGTTTTCCAGACCTCTATCATTAGAGACTACCCTGCAGAGCTGATCGTAACCCTCATTTCTCACATATTTGCAACCATGCAATCTTCTCTAGTCTCTCTGATCGCAGAAAGAGATCCAAGTGCTTGGAGGCTAAGGCTTGATATGGAGTTGATAGCTGTTGGATACTCGGGAATTTTTGTGGTTGCATTGCGAGGTGCTGTTTATGCATGGGTTCTGCACCAAAAGGGACCTGTCTTTGTAGCCATGTTTAAGCCAGCTGGGATCGTTATTGCAGTTATCATGGGGGTTACTTTTCTCGGGGATAAGCTCCATCTTGGCAGTGTGATTGGAGCTGCTATAATAGCTCTTGGGTTTTATACTGTGGTTTGGGGGAAAGCCAAAGAAGAGAAGATGGCTGAAGACATTGCAGCTTGTGGCGTTAACACATCCTCCCACAGAGTTCCCCTTCTCCAAAACAAAAGCACTGAAGTGTAG 699 0.4592 MEKLDLKVKSSRAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIGGFLTAAAAFMVAVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLRLDMELIAVGYSGIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHLGSVIGAAIIALGFYTVVWGKAKEEKMAEDIAACGVNTSSHRVPLLQNKSTEV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0868 232 Pfam EamA-like transporter family 59 197 IPR000620 GO:0016020
Vvi1g0868 232 SUPERFAMILY Multidrug resistance efflux transporter EmrE 121 202 - -
Vvi1g0868 232 PANTHER WAT1-RELATED PROTEIN 1 208 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0868 Vvi-Chr1 9242360 9243555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0868 1 206 Nodulin-like Gene Family AT5G40240 42.654 2.00e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0868 - - vvi:100267362 445.277