Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0855 ATGTTTTTGTTTGTTGGAATAAGATATAGCTCTCCTACTTTAGCCTCAGCCATGACTGATCTTGTCCCTGCTTTTACCTTCATACTCGCCATCATTTCCAGGATGGAAAAGTTAGACTTGAAAGCTGGAAGCTGTCGTGCCAAATGTATTGGTACCATAGTATCAATCATAGGGGCGCTCATTGTGACTATATACAAAGGCCCCCAAATTGCTTTTGCATCATCCACTTTTAAAATACTGGATGAGAATCTTAGGTCGCAGATATCAAACTGGGTCATTGGAGGGTTTCTCCTTGCAATTTCTGCCGTCTCGATTGCACTCTTTTATGTTGTTCAGACCTCCATCATTAGAGACTACCCTGCAGAGCTGATGTTAACATTCATTTGTCACATCTTTGTGACCATGCAATCTTCCATTGTCTCTCTGATTGCAGAAAGAGATCCAAGTGCTTGGAGATTAAAGCCTGATGTGGAGTTGATAGCTGTTGGATACTCAGCAGTACTGGTGCTTGCATTTCGTGGTACTGCACACGCATGGGTTCTGCACAAAAAGGGGCCTGTCTTTGTAGCCATGTTTAAGCCAGTCGCGATCGTCATTGCAGTTGTCATGGGGGTTACTTTTCTCGGGGATGTTCTCCATCTTGGCAGTGTAATTGGAGCTGCCATAATAGCTTTTGGGTTTTATACTGTGATGTGGGGGAAAGCCAAAGAAGAGATTGAAGACATGACAACCAGTGGCATTGACTCATCCTCCCATAAAGATCCTCTTCTACAAAACAAGAGCACCCAAGTGTAG 795 0.4365 MFLFVGIRYSSPTLASAMTDLVPAFTFILAIISRMEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIGGFLLAISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLKPDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHLGSVIGAAIIAFGFYTVMWGKAKEEIEDMTTSGIDSSSHKDPLLQNKSTQV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0855 264 PANTHER WAT1-RELATED PROTEIN 2 245 IPR030184 GO:0016020|GO:0022857
Vvi1g0855 264 MobiDBLite consensus disorder prediction 243 264 - -
Vvi1g0855 264 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 235 - -
Vvi1g0855 264 MobiDBLite consensus disorder prediction 244 264 - -
Vvi1g0855 264 Pfam EamA-like transporter family 93 231 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0855 Vvi-Chr1 9118167 9120059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0855 6 257 Nodulin-like Gene Family AT5G40240 48.450 7.71e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0855 - - vvi:100244951 511.146