Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0854 ATGGAAGAACATCTCGGCCCATTAGCTGTTACTCATCTCCTTCAACACACTCTGAGAAGCTTGTGTATTCACGAAAACTCTCAATGGGTTTATGCAGTCTTTTGGAGGATCTTGCCTAGAAACTATCCACCACCCAAATGGGATGGCCAAGCAGGAGCCTATGATAGGTCAAGAGGAAATAGGAGGAACTGGATATTAGTCTGGGAGGATGGTTTCTGCAACTTTGCTGCCTCAACAGCCGAGATCAACTCCAGCGACTGTGTGGGCTCATCAGTCTATGGCAACTGTGAATTTCAACACTTTCAAGGACTCCAACCAGAGCTCTTCTTCAAGATGTCCCATGAAATCTACAACTATGGGGAAGGTTTGATCGGAAAAGTGGCTGCAGATCAGAGTCATAAGTGGGTCTACAAAGAACCAAATGAACAAGAAATCAACTTCTTGTCTGCATGGCACAACTCAGCAGATTCGTATCCAAGGACATGGGAAGCCCAATTCCAGTCTGGGGTAAAGACCATTGCGCTGATTGCAGTTAGAGAAGGTGTCATTCAATTGGGAGCTGTTCACAAGGTGATTGAAGACCTGAGTTATGTCGTTCTACTAAGAAAGAAGTTTGGTTACATTGAAAGCATCCCAGGAGTGCTGTTGCCACACCCATCACCTTCGCCTTTCCCATTCAAAGTCGATGGGTACGGTGCACCGGACGCATGGCACTTCCAAGGAACTCCTGCTCCTGCACCAGAATTCTATGACCACTTCAATCAGCCAATGAAGATAACTCCTTCCATGAGTAGCCTTGAAGCCCTTCTATCAAAACTCCCTTCTGTTGTGCCAGTCTCATCACAGCCAACATCAGGCTACTGTGAATCACAGCCACAGTTTCTATCATCTCAGAGGCCTTTGGAACTGCTGGGAATGGAGAAGGTAACCAAGGAAGAGATCGACGATCAGGAGTACAGACATGAAAAGGATGTGGGTGAGAGCAGCAGTTCCATATCAGCTTATCGTCACCAGCACCATTTTCATCATCATCACATCTGA 1041 0.4649 MEEHLGPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWDGQAGAYDRSRGNRRNWILVWEDGFCNFAASTAEINSSDCVGSSVYGNCEFQHFQGLQPELFFKMSHEIYNYGEGLIGKVAADQSHKWVYKEPNEQEINFLSAWHNSADSYPRTWEAQFQSGVKTIALIAVREGVIQLGAVHKVIEDLSYVVLLRKKFGYIESIPGVLLPHPSPSPFPFKVDGYGAPDAWHFQGTPAPAPEFYDHFNQPMKITPSMSSLEALLSKLPSVVPVSSQPTSGYCESQPQFLSSQRPLELLGMEKVTKEEIDDQEYRHEKDVGESSSSISAYRHQHHFHHHHI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0854 346 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Vvi1g0854 346 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 233 - -
Vvi1g0854 346 MobiDBLite consensus disorder prediction 317 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0854 Vvi-Chr1 9084035 9085728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0854 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.729 1.50e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0854 - - vvi:100258629 685.641