Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0846 ATGATGGATCCGGAGGGTGGGGTTCATGCGAATCATGCTAAGAAGGAATCGTGGAGGGCTGTTTTGACCTTAGCGTACCAGAGTCTAGGCGTTGTGTATGGGGATTTGAGCACTTCTCCTTTGTATGTCTACAAGAGCACCTTCGCTGAAGACATTCAACACTCGGAGACGAACGAAGAGATTTATGGGGTTTTGTCTTTCGTTTTCTGGACTCTGACTTTGGTTCCTCTGCTCAAATACGTATTCATTGTTCTCAAAGCCGACGATAATGGTGAAGGAGGGACCTTTGCGCTTTACTCGTTGCTCTGTCGACACGCCCGAGTCAACTCATTGCCCAATTGTCAGTCTGCTGATGAGGAGCTCTCAGAATACAAGAAGGATGGTGCTGGGTCAACCGAAACTCCAAATTTCGGGTCAAGATTGAAGTCTGCACTAGAGAAGCATAGGGTGTTGCAGAGATTTTTGCTGGTTCTGGCCTTGATTGGGACTTGCATGGTGATTGGTGATGGAGTCCTCACGCCTGCCATTTCTGTTTTTTCTGCGGTGTCGGGCCTCGAGCTTTCGATGGAGAAAGAGCATCACAAATATGTAGAAGTTCCAGCTGCATGCATCATACTGATAGGCTTGTTTGCTCTCCAACATTATGGTACCCACAGGGTTGGATTCTTATTTGCACCTGTGGTAGTCACATGGCTTTTTTGTATCAGTGCGATTGGTTTATATAATATTTTTCACTGGAACCCTCATGTGTATCGAGCACTGTCTCCATACTACATGTACACATTTTTGAAGAAAACTCAAAGAGGAGGTTGGATGTCCTTGGGGGGAATCCTGTTGTGTATAACTGGTTCAGAAGCTATGTTTGCTGATCTTGGGCACTTTTCACAGTTATCAATCAAGATTGCTTTCACCTCTGTCGTATATCCATCCTTGATTCTTGCATATATGGGACAGGCTGCTTATCTATCGCAACATCATCTCATTGAAAGTGATTACCGGATTGGATTTTATGTTTCTGTACCAGAGAAACTAAGATGGCCAGTTCTGGTAATAGCCATACTTGCTGCGGTAGTGGGAAGCCAAGCTATTATCACTGGAACTTTCTCAATCATCAAACAATGCTCTGCTCTAGGTTGCTTTCCTAGAGTCAAAATAGTTCACACTTCATCCAAAATACATGGCCAGATTTACATCCCAGAGATCAACTGGATCTTAATGCTGTTATGCTTGGCTGTTACTATTGGTTTCAGAGACACAAACCGCTTGGGTAATGCATCTGGTTTGGCGGTTATAACCGTGATGCTAGTCACCACCTGCCTAATGTCTCTAGTTATTGTACTGTGTTGGCACCAGAGTGTCTTCTTTGCAATTGGCTTCATATTCTTCTTTGGCACGATTGAAGCTCTCTACTTTTCAGCTTCTCTCATCAAGTTCCTTGAAGGTGCATGGGTTCCTATTGCACTTGCTTTCATCTTTCTGATAGTCATGTATGTCTGGCACTATGGCACGCTAAAGAAATACGAGTTTGATGTCCAAAACAAGATCTCCATCAACTGGCTACTCAGCTTGGGTCCCAGCCTGGGCATTGTACGGGTTCGTGGGATTGGCATCATACACACTGAGCTTGTGTCTGGAATCCCTGCAATTTTCTCGCACTTTGTCACCAACCTTCCAGCTTTCCACCAGGTCCTAGTCTTTCTCTGCATTAAATCTGTCCCAGTTCCACATGTTAGACCTGAGGAACGGTTCCTTGTGGGTCATATTGGTCCGAGAGAGTTCAGACTCTATAGGTGTATTGTGCGATATGGTTATCGTGATGTTCACAAAGATGACTTGGATTTTGAGAAGGATCTGGTATGTAGCGTAGCAGAGTCTATCAGGTCGGGGAAAGTGGAAATCAATGGTGTGGATGACAATTCAGAGAAGGATGAAGAGAAAATGACAGTAGTTGGGTCATCTTCTACACATCCAGAAGGGATTAAAATGTGTGATGATGATGCCGACAATGCACAGGTGGCTGGAACATCAGAGCTCAAAGAGATCCAGTCTCCAACAGTGGTCCGACCAAGGAAGAGGGTTAGGTTTATAGTACCCGAGAGTCCAAAGATTGACAGGGGTGCAAGGGAGGAGCTGCAGGAACTGATGGAGGCTAGGGAGGCTGGGATCGCTTACATTCTGGGTCACTCATATGTGAAAGCAAAGCCAGGGTCTAGCATGGTGAAGAAGCTTGTGATTAATTACGGGTATGATTTTCTGAGGAGGAACTCTCGGGGGCCCTCCTATGCACTATGTGTACCCCATGCTTCTACACTGGAGGTGGGGATGAACTACCTTGTCTGA 2340 0.4543 MMDPEGGVHANHAKKESWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARVNSLPNCQSADEELSEYKKDGAGSTETPNFGSRLKSALEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMEKEHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPVVVTWLFCISAIGLYNIFHWNPHVYRALSPYYMYTFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLSQHHLIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMLLCLAVTIGFRDTNRLGNASGLAVITVMLVTTCLMSLVIVLCWHQSVFFAIGFIFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMYVWHYGTLKKYEFDVQNKISINWLLSLGPSLGIVRVRGIGIIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPREFRLYRCIVRYGYRDVHKDDLDFEKDLVCSVAESIRSGKVEINGVDDNSEKDEEKMTVVGSSSTHPEGIKMCDDDADNAQVAGTSELKEIQSPTVVRPRKRVRFIVPESPKIDRGAREELQELMEAREAGIAYILGHSYVKAKPGSSMVKKLVINYGYDFLRRNSRGPSYALCVPHASTLEVGMNYLV* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0846 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 777 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0846 779 MobiDBLite consensus disorder prediction 634 649 - -
Vvi1g0846 779 MobiDBLite consensus disorder prediction 634 660 - -
Vvi1g0846 779 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0846 779 NCBIfam potassium uptake protein 24 777 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0846 Vvi-Chr1 8939973 8950117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0846 2 779 Inorganic Solute Cotransporters AT1G70300 78.161 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0846 K03549 - vvi:100251966 1538.09