Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0845 ATGGAAGACGAAGGCGGTGGTGGAGGGATTGAAGAGACCAACTCCAGATTGATGGGCAGTAGTGGTGGAGAGTCGAGGTGGGTTGATGGGAGTGAAATGGACTCCGACTCACCTCCATGGTCCTTGTTTGGCGATGATGAGGGCAGAGAGGGTTATGGCTCTATCAGGAGGAGGCTTGTCAAGAAGCCGAAAAGAGCTGATTCTTTTGATGTTGAAGCCATGGAGATCGCCGGCTCTCATGCTCACGATTCCAAGGATCTTTCTGTTTGGCCCACTCTTGCGTTGGCATTCCAAACACTTGGTGTGGTGTATGGTGATATGGGCACCAGCCCTTTATATGTCTTTTCTGATGTATTTAGCAAGGTGCCCATTGAATCAGAGGTTGATGTTTTGGGTGCTTTGTCTCTAGTAATGTACACCATTGCTCTTCTCCCTTTTGCAAAATACGTATTTATAGTGCTCAAAGCTAATGACAATGGGGAAGGAGGAACATTTGCCTTATATTCTCTGATTTGCAGGTATGCAAAAGTTAATATGCTACCAAATCGTCAAGTAGCTGATGAACAGATCTCCAGTTTTCGCCTCAAACTGCCCACTCCAGAGTTGGAAAGGGCTTTAAATATAAAAGACAGCTTGGAAAGGAGATCCTCTTTGAGAACCCTCCTCTTGTTGTTGGTTCTAATGGGAACTTCAATGATAATTGGGGATGGCATTCTAACCCCAGCAATGTCAGTCATGTCTGCTGTGAGTGGTCTGCAAGGTGAAATACGGGGATTTGGTACAAATGCTGTGGTTCTTGTCTCAGTCATAATCCTGGTGGGATTGTTTAGCATACAGCAATTTGGAACTAGTAAAGTGGGTTTCACATTTGCTCCTGCACTTGCTTTGTGGTTCTTTTGTCTGGGATCTATTGGCATTTATAACATATATAAATACGATATTACTGTCCTACGAGCATTCAATCCAGCATATGTATACTTGTTCTTCAAGAAAAACAGCACACAGGCCTGGTCAGCCCTCGGTGGCTGTGTTTTGTGCATCACAGGAGCTGAGGCAATGTTTGCTGATCTAGGGCACTTCTCTGTACGAGCGATTCAGATTGCCTTTACTTGTGTTGTGTTCCCCTGCCTTCTCTTGGCTTACATGGGCCAAGCTGCATTCCTAATGAAACACCCCCACTCAACAGGAAGGATATTCTATGATTGTGTCCCAGATGGTTTATTCTGGCCAGTCTTTGTGATAGCCACACTTGCAGCCATGATTGCCAGTCAAGCCATGATATCTGCTACATTTTCATGCATCAAGCAATCCATGGCCCTCGGATGTTTCCCAAGGCTGAAGATCATTCATACCTCGAGGAAGCTAATGGGTCAAATCTACATCCCTGTCATCAACTGGTTTTTAATGATCATGTGTGTAGTTGTAGTGGCCTCCTTCCAAAGCACCACAGACATAGCAAATGCATATGGGATAGCTGAAGTTGGTGTAATGATAGTAAGCACTACCTTGGTGACGCTTGTAATGCTTCTAATCTGGCAGATCAACTTGTTTCTTGCTCTGTGTTTCCCACTGGTATTTGGAACAGTAGAGCTCATCTACCTATCGGCAGTTCTAACAAAAATCAAAGATGGTGGTTGGCTTCCACTTGTTTTTGCATCTTGCTTCCTCTGCGTGATGTACATTTGGAACTACGGGAGCGTGCTCAAGTACCAGAGTGAGGTCAGGGAGAAGATCTCCATGGACTTGATGCTTGATCTAGGGTCCAGCCTTGGGACTGTACGAGTTCCAGGAATCGGATTGCTGTACAATGAGCTAGTCCAAGGCGTTCCCTCCATTTTTGGGCAGTTCCTACTGAGCCTTCCAGCCATCCACTCTACCGTAGTGTTTGTTTGCATTAAGTATGTCCCAATCCCAGTTGTCCCTCAAGAGGAAAGGTTCTTATTTCGAAGGGTTTGTCCTAGAGACTACCATATGTTCCGTTGTGTTGCTAGATATGGTTACACAGATATCCGGAAGGAAGATCACCACTCATTTGAGCAACTTTTAGTTGAAAGCCTCGAGAAGTTCTTGAGAAGGGAATCTCAAGATCTTGCCTTGGAAAGCAATTTAAACGAGTTGGATTTTGATAGTGTTTCAGTGAGGTCAAGGGACAGTGACACAGCAGGGGACGATCTTAGGATTCCATTGATGTGGGATCAGAGATTGGGAGAAGCGGGAGAAGCAGGAACTTCTTTGTCAGGAGAAACCACCTCAGGATTGCCATCAGATGAAGATCCAAGCTTGGAGTATGAGCTTTCTGCTCTCAAAGAAGCAATGAATTCAGGATTTACTTATTTGCTTGGGCATGGTGATGTAAGGGCCAAAAAGAATTCTTGGTTCATCAAGAAACTGGCCATAAACTATTTCTATGCATTCTTGAGAAGGAACTGCAGAGCTGGAACAGCCAATCTGCGTGTTCCTCACATGAATATCATGCAAGTTGGGATGACATACATGGTCTGA 2502 0.4488 MEDEGGGGGIEETNSRLMGSSGGESRWVDGSEMDSDSPPWSLFGDDEGREGYGSIRRRLVKKPKRADSFDVEAMEIAGSHAHDSKDLSVWPTLALAFQTLGVVYGDMGTSPLYVFSDVFSKVPIESEVDVLGALSLVMYTIALLPFAKYVFIVLKANDNGEGGTFALYSLICRYAKVNMLPNRQVADEQISSFRLKLPTPELERALNIKDSLERRSSLRTLLLLLVLMGTSMIIGDGILTPAMSVMSAVSGLQGEIRGFGTNAVVLVSVIILVGLFSIQQFGTSKVGFTFAPALALWFFCLGSIGIYNIYKYDITVLRAFNPAYVYLFFKKNSTQAWSALGGCVLCITGAEAMFADLGHFSVRAIQIAFTCVVFPCLLLAYMGQAAFLMKHPHSTGRIFYDCVPDGLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSRKLMGQIYIPVINWFLMIMCVVVVASFQSTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWQINLFLALCFPLVFGTVELIYLSAVLTKIKDGGWLPLVFASCFLCVMYIWNYGSVLKYQSEVREKISMDLMLDLGSSLGTVRVPGIGLLYNELVQGVPSIFGQFLLSLPAIHSTVVFVCIKYVPIPVVPQEERFLFRRVCPRDYHMFRCVARYGYTDIRKEDHHSFEQLLVESLEKFLRRESQDLALESNLNELDFDSVSVRSRDSDTAGDDLRIPLMWDQRLGEAGEAGTSLSGETTSGLPSDEDPSLEYELSALKEAMNSGFTYLLGHGDVRAKKNSWFIKKLAINYFYAFLRRNCRAGTANLRVPHMNIMQVGMTYMV* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0845 833 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0845 833 MobiDBLite consensus disorder prediction 1 49 - -
Vvi1g0845 833 NCBIfam potassium uptake protein 95 833 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0845 833 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 87 831 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0845 Vvi-Chr1 8922756 8933413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0845 10 833 Inorganic Solute Cotransporters AT1G60160 76.386 0.0 1290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0845 K03549 - vvi:100257092 1591.25