Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0820 ATGCTGAAGCAAAAGAAGCAACTACTTGAAGGCAGTGATACTGATGATCAGATAACTGGTATCAGAGATCAAATGATGAGTGACTCATGGTCACCTGTTCTCACAGTGAGAGATTTGGGTTCTATGTTAGAGGTGTGCGTGAAGAGTGGGTCAAACAAGAAGTTCATGTTGCATCAAGTAATCCAAGTTCTTGTGGAAGAAGCAGCTCAGGTTGTAGCTCTTAGCTACTCCAATGTTGGGGATAGGATCTTCTATACGATTAACGCTGAGGCTGTTAGTCCTAGAATTGGCATAGAGACTTCAAGGGTGCATGAAAGATTGAAGGAACTGATTTTTTGA 339 0.4189 MLKQKKQLLEGSDTDDQITGIRDQMMSDSWSPVLTVRDLGSMLEVCVKSGSNKKFMLHQVIQVLVEEAAQVVALSYSNVGDRIFYTINAEAVSPRIGIETSRVHERLKELIF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0820 112 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0820 Vvi-Chr1 8527687 8528181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0820 32 111 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 28.395 2.58e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0820 - - vvi:104880037 208.379