Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0780 ATGAACACTGTTGCTGCTAGTTCAACAGATAGGGATTTTATATCTGATATCGTATTAGGAGATGGTGCTAATTTCAATGGTGAAAGTCTGAGTCTGTTTGAAATGAATGCCTCCACAAGCATCATCTCTGCTTCAGAAGCCTATGCAGGATACTTCACTCCCTATCAATCCAGCTACTGTTTGGAGACTTCCTTGAATAATACTAAAGCCAGACGGAAGATTTTGGTATGCCAACATGCTGAAAGTTCAACAGATTCCAAGCTGGCAAAGAGTGCAGTAGTCAGAGAAGCTGGTGGAGTTGGAAGGAGCATGGGGACAGGATTCTATCCTATATTAATCATACAAGGCTATTCCATTTACATGAATAGCAAACCGGTTTCTAGAATTTTCCCTGCAAAAACTGTATTGGGATCTCATCCTCCTGCCCCTCGAGTTGCAGCATTTTCTTCAAAAGGTCCCAATGCCTTAATCCCAGAAATTTGGAAGCCTGATGTCATGGCTCCTGGATTGAATTTTCTTGCAGCCTAG 528 0.4223 MNTVAASSTDRDFISDIVLGDGANFNGESLSLFEMNASTSIISASEAYAGYFTPYQSSYCLETSLNNTKARRKILVCQHAESSTDSKLAKSAVVREAGGVGRSMGTGFYPILIIQGYSIYMNSKPVSRIFPAKTVLGSHPPAPRVAAFSSKGPNALIPEIWKPDVMAPGLNFLAA* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0780 175 Gene3D Peptidase S8/S53 domain 3 175 IPR036852 GO:0004252|GO:0006508
Vvi1g0780 175 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 175 IPR045051 -
Vvi1g0780 175 SUPERFAMILY Subtilisin-like 3 174 IPR036852 GO:0004252|GO:0006508
Vvi1g0780 175 CDD PA_subtilisin_like 16 101 - -
Vvi1g0780 175 Gene3D - 10 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0780 Vvi-Chr1 7942103 7942980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0780 1 175 Subtilisin-like Serine Gene Family AT4G34980 35.385 1.85e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0780 - - vri:117918600 287.345