Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0735 ATGAGCATGGAAATTTCTGAACCAGAACCTCAGCATCCAAAATTCGCTCTTCCGGTGGACTCTGAACACAAGGCCACTGAATTTCCCTTATTCTCAGTGGCGGCACCACACATGAGGGCATTTCACTTGTCTTGGATCTCCTTCTTTGCTTGTTTTGTCTCCAGCTTTGCAGCTCCTCCTCTCATCCCTGTCATACGGGACAACCTCAATCTTACAGCAACAGATATTGGCAATGCAGGGATTGCATCAGTTTCTGGTGCAGTCTTTGCCAGGATTGCCATGGGGAGTGCCTGTGACCTATTTGGACCCCGTCTTGCCTCCGCCTCACTCATCCTCCTCACTGCACCAGCTGTTTACTTTACTTCCTATATCTCATCACCTATCTCCTTCCTTCTTGTACGCTTTTTCACAGGCTTCTCCCTTTCCACTTTCGTTTCAACTCAATTCTGGATGAGTTCAATGTTTTCTGCTCCAGTGGTTGGGGCTGCAAATGGTTTTGCAGGTGGATGGGGCAACCTCGGAGGTGGGGCAACACAGCTAATCATGCCACTTGTTTTTTCCCTCATCCGTGACATGGGTGCGGTCAAATTCACAGCCTGGAGAATAGCATTCTTCATTCCAGCTCTATTCCAAACGTTATCAGCTTTTGCTGTTTTGTTATTTGGTCAAGACACACCAGATGGTAACTTCAAGAGACTGAATAAATCTGGTGACAGACCAAAAGATAAATTTTCACAGGTTTTCTACCATGGGGTTACAAATTACAGGGCATGGATATTGGCATTGACTTATGGATATTGTTTTGGAGTAGAGCTGACAGTGGACAACATAATTGCAGAGTATTTTTATGACAGATTTAATCTCAAACTCCACACTGCAGGAATTATTGCTGCAAGTTTTGGATTAGCAAATTTGATTTCTCGACCAGCAGGAGGGTTTATCTCAGATGCAATGGCAAAGAGGTTTGGGATGAGGGGCAGGCTGTGGACCTTATGGGTGGTGCAGACCTTGGGAGGTGTACTCTGCATTATCCTGGGACGAGTAGGATCTTTGAATGCATCCATCATTGTGATGATTGCATTCTCATTGTTCGTCCAAGCTGCATGTGGTCTTACATTTGGAGTGGTTCCTTTCATCTCCCGAAGGTCACTGGGGGTAGTATCTGGTATGACAGGAGGAGGTGGAAATGTAGGTGCAGTTCTGACTCAACTAATTTTCTTCAAAGGATCCAGATATTCAAAAGAAACAGGGATAACTCTCATGGGCATCATGATGTTATGCTGCACCCTTCCAATATGTCTAATATACTTCCCACAATGGGGTGGCATGTTTTGCGGCCCATCATCTAAAGAGAATGCCACAGAGGAAGACTATTACTCATCTGAATGGAATTCAAAAGAGAAGGAGAAAGGTTTCCATCATGGAAGTCTGAAATTTGCTGATAACAGCAGAGGTGAAAGAGGTAGAAGGGTGGGCTCTGCAGCCACACCTGATAGGACCTCATCCATGCATGTCTGA 1518 0.4526 MSMEISEPEPQHPKFALPVDSEHKATEFPLFSVAAPHMRAFHLSWISFFACFVSSFAAPPLIPVIRDNLNLTATDIGNAGIASVSGAVFARIAMGSACDLFGPRLASASLILLTAPAVYFTSYISSPISFLLVRFFTGFSLSTFVSTQFWMSSMFSAPVVGAANGFAGGWGNLGGGATQLIMPLVFSLIRDMGAVKFTAWRIAFFIPALFQTLSAFAVLLFGQDTPDGNFKRLNKSGDRPKDKFSQVFYHGVTNYRAWILALTYGYCFGVELTVDNIIAEYFYDRFNLKLHTAGIIAASFGLANLISRPAGGFISDAMAKRFGMRGRLWTLWVVQTLGGVLCIILGRVGSLNASIIVMIAFSLFVQAACGLTFGVVPFISRRSLGVVSGMTGGGGNVGAVLTQLIFFKGSRYSKETGITLMGIMMLCCTLPICLIYFPQWGGMFCGPSSKENATEEDYYSSEWNSKEKEKGFHHGSLKFADNSRGERGRRVGSAATPDRTSSMHV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0735 505 MobiDBLite consensus disorder prediction 476 505 - -
Vvi1g0735 505 FunFam Nitrate transporter 2.1 241 442 - -
Vvi1g0735 505 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Vvi1g0735 505 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 490 IPR044772 GO:0015112
Vvi1g0735 505 MobiDBLite consensus disorder prediction 476 493 - -
Vvi1g0735 505 Gene3D MFS general substrate transporter like domains 241 441 IPR036259 -
Vvi1g0735 505 SUPERFAMILY MFS general substrate transporter 26 436 IPR036259 -
Vvi1g0735 505 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Vvi1g0735 505 Gene3D MFS general substrate transporter like domains 35 231 IPR036259 -
Vvi1g0735 505 FunFam High affinity nitrate transporter 2.5 33 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0735 Vvi-Chr1 7422823 7426109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0735 14 489 Inorganic Solute Cotransporters AT1G12940 77.941 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0735 K02575 - vvi:100260250 969.148