Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0704 ATGGAGCTCTATTCCCCATCAATGTGGCTTCATCTGCTTCTGCTACTTCTCCCTCTAATGTTTCTCATAAAACGGAAAATAGAGTTGACGGGGCAAAAGAAGCCGCTGCCTCCTGGCCCTACTAAGCTTCCCATTATAGGTAATTTGCACCAACTTGGTGCGTTGCCTCACTACTCTTTATGGCAACTATCTAAGAAATATGGCTCCATCATGCTCCTTCAGCTCGGTGTCCCTACCGTCGTAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTGCAGTCGACCTCCCTTAGTTGGACTTGGAAAATTCTCATACAATCACCGAGACATATCTTTTGCGCCATACGGCGACTACTGGAGGGAGGTACGCAAGATCTGTGTTCTCGAGGTGTTTAGCACAAAAAGGGTGCAGTCGTTTCAGTTCATCAGAGAAGAGGAGGTCGCTTTGCTGATTGATTCAATTGTGCAATCGTCTTCTTCTGGAAGTCCTATTGATCTTACCGAGAGGCTAATGTCTCTCACAGCAAATATAATTTGTAGGATTGCATTCGGAAAGAGTTTTCAAGCGAGTGAGTTTGGTGACGGAAGATTTCAAGAAGTGGTTCATGAAGCCATGGCTTTGTTGGGCGGGCTCACTGCAGCCGATTTCTTTCCGTACGTGGGTCGGATTGTGGATAGACTCACTGGTCTTCATGGAAGGCTTGAGAGGAGTTTCCATGAAATGGACGGCTTCTACCAACAGGTGATCGAAGACCATCTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATCATCGACGTGCTGCTGAGAATAGAGAGGGAACAATCTGAATCCAGTGCCCTACAGTTTACTAAAGATAACGCGAAAGCAATCGTTATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCGTATCTTGGGCAATGACCGAGCTTGCTAGGAACCCAAGAATAATGAAAAAAGCCCAGGCTGAAGTTAGAAACTCCATTGGAAATAAAGGAAAAGTCACGGAGGGTGATGTCGATCAGCTTCACTACCTCAAGATGGTGGTCAAAGAAACTTTGAGACTGCATCCTCCCGCCCCACTTCTACTTCCAAGAGAAACCATGTCACATTTTGAGATAAACGGATACCACTTTTACCCGAAAACCCAAGTCCACGTAAACGTTTGGGCAATTGGGCGAGACCCCAACCTCTGGAAGAACCCAGAGGAGTTTTTGCCCGAGAGGTTTATGGACAACTCTGTAGATTTTAGAGGACAACATTTTGAGCTACTGCCTTTCGGAGCGGGAAGAAGAATTTGCCCGGGTATGTATATGGCGATTGCAACAGTGGAGCTCGCACTTGCTAATCTTTTATATCGTTTCAATTGGAACTTGCCGAATGGGATGAAGGAGACAGATATTAGCATGGAAGAAGCAGCAGGCCTTACTGTCCGTAAGAAGTTTGCTCTTAACCTTGTGCCAATTCTCCATCACTGTTAA 1518 0.4605 MELYSPSMWLHLLLLLLPLMFLIKRKIELTGQKKPLPPGPTKLPIIGNLHQLGALPHYSLWQLSKKYGSIMLLQLGVPTVVVSSAEAAREFLKTHDIDCCSRPPLVGLGKFSYNHRDISFAPYGDYWREVRKICVLEVFSTKRVQSFQFIREEEVALLIDSIVQSSSSGSPIDLTERLMSLTANIICRIAFGKSFQASEFGDGRFQEVVHEAMALLGGLTAADFFPYVGRIVDRLTGLHGRLERSFHEMDGFYQQVIEDHLNPGRVKEEHEDIIDVLLRIEREQSESSALQFTKDNAKAIVMDLFLAGVDTGAITVSWAMTELARNPRIMKKAQAEVRNSIGNKGKVTEGDVDQLHYLKMVVKETLRLHPPAPLLLPRETMSHFEINGYHFYPKTQVHVNVWAIGRDPNLWKNPEEFLPERFMDNSVDFRGQHFELLPFGAGRRICPGMYMAIATVELALANLLYRFNWNLPNGMKETDISMEEAAGLTVRKKFALNLVPILHHC* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0704 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vvi1g0704 505 FunFam Cytochrome P450 83B1 22 499 - -
Vvi1g0704 505 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PANTHER CYTOCHROME P450 71B11-RELATED 20 501 - -
Vvi1g0704 505 Pfam Cytochrome P450 37 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0704 505 CDD CYP71-like 66 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0704 Vvi-Chr1 7047898 7050179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0704 14 500 Cytochrome P450 AT3G26310 55.758 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0704 - - vvi:100245779 984.941