Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0698 ATGGCACCCTATTCCCCGGATCTGTGGCTTCCCCTGGTTCTCCTATTCCTCTCACTGCTGTTTCTTCTGAAGAAAATATTAGAGTTGAAGGAGCAAAAGGGGCCTCCTGGCCCTCCTAAGCTTCCCATTATAGGTAACTTGCACCAACTTGGTGCGTTGATTCACCAATCTCTGTGGCAACTATCTAAGAAATATGGCCCTGTAATGCTCCTTCACCTGGGTTTTGTTCCTACCCTTGTAGTCTCATCCGCAGAAGCTGCAAAAAAGGTGTTGAAAGATCATGATATTTCCTGTTGCAGTAGACCTCCCTTAATCAGCATTGGAAGACTGTCCTACAATTATCTTGACATATCTTTTGCACCATACGGCCCATATTGGAGGGAGATCCGAAAGATATGCGTTCTCCAGCTTTTCAGCACGAATAGGGTGCAGTCATTTCAGGTCATCAGAGAAGCAGAGGTTGCTTTGCTGATTGATTCCTTGGCACAATCATCTTCTTCTGCAAGCCCCGTTGACCTCACTGACAAGATCATGTCTCTCACTGCAAATATGATTTGCAGGATTGCATTTGGGAGGAGTTTTGAAGGGAGTGAATTCGGTAAAGGGAGATTTCAAGAAGTGGTTCATGAAGCCACTGCCATGATGAGCAGCTTCTTTGCGGCTGATTTCTTTCCATATGTCGGTAGGATTGTGGATAGACTCACTGGGATTCATGAAAGGTTGGAGAAGAGTTTCCATGAATTGGATTGCTTTTACCAACAGGTGATTGAGGAGCATCTCAATCCAGGAAGGATGAAAGAGGAGCATGAGGACATTATTGACGTGCTTCTCAACATAGAGAAGGAACAAGATGAATCTAGTGCATTTAAGCTCACTAAAGATCATGTTAAAGCAATCCTTATGGATTTGTTCTTGGCCGGAGTAGACACCGGTGCAATAACCGTGGTCTGGGCAATGACCGAGCTTGCTAGGAAGCCAGGAGTGAGGAAGAAAGTACAAGATGAAGTCAGAAGTCATATCCGAGAAAGAGGAAAAGTCAGGGAAAGTGATATTGAGCAGTTTCACTACCTCAAGATGGTGGTTAAAGAAACCCTGAGACTACATCCTCCTGTTCCTCTTCTACTTCCAAAAGAAACCATGTCCACTATAGAGATTAGTGGGTACCAGATTTATCCAAAAACCCAAGTCTACGTTAACGTATGGGCGATTGGGCGAGATCCCAACCTCTGGAACAACCCAGAAGAGTTCTTCCCAGAGAGGTTTATTGACAACTCCGTTGATTTCAAAGGACAACATTTTGAGTTTCTGCCCTTTGGGGCGGGGCGAAGAGTTTGTCCTGCCATGAATATGGCGATAGCAATGGTGGAGCTCACACTTGCCAATCTCTTGTATCATTTCAATTGGAAACTGCCCCATGGGATGAAGGAGGGAGATATCAACATGGAAGAAGCACCAGGCCTCTCTGTCCATAAAAAGATTGCTCTAAGCCTTGTGCCAATCAAATATCCTTGA 1512 0.4491 MAPYSPDLWLPLVLLFLSLLFLLKKILELKEQKGPPGPPKLPIIGNLHQLGALIHQSLWQLSKKYGPVMLLHLGFVPTLVVSSAEAAKKVLKDHDISCCSRPPLISIGRLSYNYLDISFAPYGPYWREIRKICVLQLFSTNRVQSFQVIREAEVALLIDSLAQSSSSASPVDLTDKIMSLTANMICRIAFGRSFEGSEFGKGRFQEVVHEATAMMSSFFAADFFPYVGRIVDRLTGIHERLEKSFHELDCFYQQVIEEHLNPGRMKEEHEDIIDVLLNIEKEQDESSAFKLTKDHVKAILMDLFLAGVDTGAITVVWAMTELARKPGVRKKVQDEVRSHIRERGKVRESDIEQFHYLKMVVKETLRLHPPVPLLLPKETMSTIEISGYQIYPKTQVYVNVWAIGRDPNLWNNPEEFFPERFIDNSVDFKGQHFEFLPFGAGRRVCPAMNMAIAMVELTLANLLYHFNWKLPHGMKEGDINMEEAPGLSVHKKIALSLVPIKYP* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0698 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vvi1g0698 503 CDD CYP71-like 64 495 - -
Vvi1g0698 503 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0698 503 PANTHER CYTOCHROME P450 71B11-RELATED 20 500 - -
Vvi1g0698 503 FunFam Cytochrome P450 83B1 21 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0698 Vvi-Chr1 7005787 7007375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0698 7 502 Cytochrome P450 AT3G26300 54.527 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0698 - - vvi:104877321 947.577