Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0689 ATGGTTGGAAGGATTGTTATCTCTGCAGTAGACTGGGTGGTTCATCATATATGGTTTTCTGACATAGCTGTGGCTTTGTCGAGCATATTCATCTTCAGTTCTATACTTCATAGACTCACCAACAAAGGTCCCATGTTATGGCCGGTGATGGGAATCATACCAACAGTATTCTTCCACATGAACGACATCTACAATTGGGGAACCAGAGTTCTGATCCGAGCTGGGGGGACATTCTACTATAGGGGAATGTGGATGGGTGGTAGTTACGGGATTATGACTATTGATCCTGCCAACATTGAGTACATGCTCAAGACAAGGTTCAAGAACTTCCCCAAAGGCAATTACTATAGAGAGAGGTTCAATGATTTGCTCGGGGGTGGCATTTTCAATGCAGATGATGAATCATGGAAGGAGCAAAGGCGACTTGCGACTTTTGAGATGCATTCGGGTCCGTTCGTGGCGCACTCGTTTCAGACCATACAAGGTTTGGTGCACCAGAAGCTGTTGAAACTGATAGAGAAGCTGGCAAAGTCAGGAGATTGTATTGATCTGCAAGAAGTGCTTCTTCGTTTTACATTTGATAATATTTGCACTGCAGCTTTTGGTGTTGATCCAGGGTGCTTGGCTCTAGATTTACCCGAAGTTCCTTTTGCCAAAGCTTTCGAGGAAGCCACGGAATCAACACTGTTCAGGTTCATTGTGCCTCCTTTTGTGTGGAAGCCCATGAGGTTCTTTAGAGTAGGAACTGAGAAGCGGCTCAAGGAAGCAGTGCGAATTGTACATGATTTTGCTGAGAAGACGGTGACAGAACGGAGGATTGAATTGAGTAAGGCCGGCAGTTCGACTAACCGATGTGATCTCTTGTCCAGGATTGTGGCCATTGGGTACTCGGAACAAGGCAAAAACAACAACTTCTCTGACAAGTTTCTCAAGGATTTTTGCATTAGCTTCATCTTAGCTGGGCGAGACACGAGCTCTGTTGCACTGGCGTGGTTCTTCTGGTTAATACACAAAAACCCAGATGTGGAAAGCAGAATTCTCAGCGAAATCAAAGAAGTCTTGGGTCCGTACGACTCCAACAAGGAAGACCTAAGTCAGAGAGCTTTTACAGTGGAAGAACTAAAGAAGATGGTGTATCTGCAAGCGGCCTTAACAGAGTCCCTGCGGCTCTACCCATCTGTGCCAATCGACTTCAAAGAGGTTATGGAAGATGACGTGTTCCCAGACGGCACACCCATCAAACGTGGGGCCAGGGTCCTCTACTCCATCTTCTCCATGGCTCGAATCGAGTCCATATGGGGGAAAGACTGCATGGAGTTCAAGCCAGAGAGGTGGATCAAAGACGGGGAGCTTGTGAGTGAGAATCAGTTTAAGTATCCAGTGTTTAATGCTGGACCCAGGCTTTGCATAGGGAAAAAGTTTGCCTACATGCAGATGAAAATGGTGGCTGCTTCGATCCTGATGAGGTACTCGGTTAAGGTTGTTGAAGGTCATAACGTTATTCCCAAAATGACAACCACACTCTACATGAAGAATGGCTTATTGGTGACTTTCAAGCCTAGTTGTAGCAGTGGGAGGAAAACAAATGGACGTACGTCTTCGTTTGCTCTCGTGTTGTACAATATATATGAACTAATGAATTTTACACATCAAGTTTGTACGTACAATGTGAAATTTAACTAA 1683 0.4522 MVGRIVISAVDWVVHHIWFSDIAVALSSIFIFSSILHRLTNKGPMLWPVMGIIPTVFFHMNDIYNWGTRVLIRAGGTFYYRGMWMGGSYGIMTIDPANIEYMLKTRFKNFPKGNYYRERFNDLLGGGIFNADDESWKEQRRLATFEMHSGPFVAHSFQTIQGLVHQKLLKLIEKLAKSGDCIDLQEVLLRFTFDNICTAAFGVDPGCLALDLPEVPFAKAFEEATESTLFRFIVPPFVWKPMRFFRVGTEKRLKEAVRIVHDFAEKTVTERRIELSKAGSSTNRCDLLSRIVAIGYSEQGKNNNFSDKFLKDFCISFILAGRDTSSVALAWFFWLIHKNPDVESRILSEIKEVLGPYDSNKEDLSQRAFTVEELKKMVYLQAALTESLRLYPSVPIDFKEVMEDDVFPDGTPIKRGARVLYSIFSMARIESIWGKDCMEFKPERWIKDGELVSENQFKYPVFNAGPRLCIGKKFAYMQMKMVAASILMRYSVKVVEGHNVIPKMTTTLYMKNGLLVTFKPSCSSGRKTNGRTSSFALVLYNIYELMNFTHQVCTYNVKFN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0689 560 CDD CYP86A 78 514 - -
Vvi1g0689 560 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 Pfam Cytochrome P450 82 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 SUPERFAMILY Cytochrome P450 42 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 PANTHER CYTOCHROME P450 35 514 - -
Vvi1g0689 560 FunFam Cytochrome P450 34 523 - -
Vvi1g0689 560 Gene3D Cytochrome P450 40 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0689 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0689 Vvi-Chr1 6936328 6938135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0689 5 520 Cytochrome P450 AT1G24540 60.192 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0689 - - vvi:100250807 1055.82