Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0658 ATGACTCCTTATAAGAGATCTAGGATGATCTTGCGTTTTGCTGATTTGCTTGAAAAGCACAATGATGAGATTGCAGCACTCGAAACTTGGGATAATGGGAAGCCATATGAACAAGCTGCAAAGGTTGAAGTACCATTGATGATACGTTTGATGCGGTACCATGCGGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCTGCTGATGGATTGCATCAAGTTGGACCTGCATTAGCATGTGGTAACAATATCGTTCTAAAGACAGCAGAGCAGACACCATTGTCTGCCTTGTATCTATCAAAGTTATTGCATGAGGCCGGGCTTCCTCCAGATGTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATTTGGATATGGGCAAGCTTGCTTTCACTGGATCAACTGTAACTGGAAATTCTGTTCTTCAATTGGCTGCAGGGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTGTCATTGTGTGTGAGGATGCTAATGTAGATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTTAATCAGTGGCAATGTTGTGCTGCTTGCTCTCGTACATTTGTACATGAAAGTATATATGATGAGTTTGTAGAGAAGGCAAAGACACGTGCTTTAAGACGTACCATTGGTAATCCATTCAAGGCAGGCATTGAGCAAGGCCCCCAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTTGAAAATGCAGGTACCCTTGAAACTGGAGGTGAGAGATTTGGCAATGAGGGCTTCTTCATTAAGCCTACAGTTTTCTCAAATGTTCAGGATGGCATGTTGATAGCACAGGACGAGATATTTGGACCAGTTCAGTCCATCCTGAAATTCAAGGACCTTGATGAGGTGATAAGAAGGGCAAACGCCGCTAGTTATGGGTTGGCCGCAGGAGTCTTTACCCAGAACTTAGACACAACCAACACCCTGACCCGTGCACTAAGGGTGGGCACAGTATGGGTTAACTGCTTTGATGTGTTTGATGCAGCGATTCCTTTTGGTGGGTACACGATGAGTGGGCATGGCAGAGAAAAGGGTATGTACAGTCTTCAAAATTACCTGCAAGTGAAGGCTGTTATTGCTTCCTTGAAGAACCCTGCGTGGTTATAA 1191 0.4467 MTPYKRSRMILRFADLLEKHNDEIAALETWDNGKPYEQAAKVEVPLMIRLMRYHAGWADKIHGLTVPADGLHQVGPALACGNNIVLKTAEQTPLSALYLSKLLHEAGLPPDVLNVVSGYGPTAGAALASHLDMGKLAFTGSTVTGNSVLQLAAGSNLKPVTLELGGKSPVIVCEDANVDEAVELAHFALFFNQWQCCAACSRTFVHESIYDEFVEKAKTRALRRTIGNPFKAGIEQGPQIDSDQFEKILRYIRSGVENAGTLETGGERFGNEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLDEVIRRANAASYGLAAGVFTQNLDTTNTLTRALRVGTVWVNCFDVFDAAIPFGGYTMSGHGREKGMYSLQNYLQVKAVIASLKNPAWL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0658 396 FunFam Aldehyde dehydrogenase, putative 358 384 - -
Vvi1g0658 396 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 386 IPR016162 GO:0016491
Vvi1g0658 396 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 168 357 IPR016163 GO:0016620
Vvi1g0658 396 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 70 - -
Vvi1g0658 396 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 162 169 IPR029510 GO:0016491
Vvi1g0658 396 SUPERFAMILY ALDH-like 1 389 IPR016161 GO:0016491
Vvi1g0658 396 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 72 IPR016162 GO:0016491
Vvi1g0658 396 Pfam Aldehyde dehydrogenase family 72 386 IPR015590 GO:0016491
Vvi1g0658 396 Pfam Aldehyde dehydrogenase family 1 68 IPR015590 GO:0016491
Vvi1g0658 396 FunFam Mitochondrial aldehyde dehydrogenase 2 168 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0658 Vvi-Chr1 6625121 6628344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0658 1 396 Aldehyde Dehydrogenase Gene Family AT3G48000 68.558 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0658 K00128 - vvi:100267386 709.909