Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0606 ATGGACGCTACTGGTAGGGTCATGTTTCGGCGGTCAACCTCCGGTTTAACAGTGCTAGCACACTCGTTTGGCATCTTATCTCTCATCCTATTGCTGTTTTGGTTATTGCATTATCGTGGAGGTCTTAATCTTGAATCTGACATTTCAGAACGTATTTTTAATGTTCACCCATTCATGATGTTCTTTGGGCTTATTTTTCTCTCGGGTGAAGGAATGATGGCATACAAGACGATAGCAGCAGAAAAACCTGTCCAGAAGTTTATTCACATGCTGCTTCACCTGATTGCTATTTGTATGGGAATTATTGGAATACATGCTGTTTTAAAGTTTCATAACAAGGAGAACATAGAAGATTTCTATAGCTTGCATTCATGGGTAGGCATTGCCACCTTCAGCATTTTTCTCTTGCAGTGGTTGGTTGGGTTTGTGTTGTTCATGTTTCCAAAAGCTTCGCCAGGGACAAGAGCAAGGGCGCTTCCATGGCACATATGTGGGGGTAGGGCCCTATTATACATGGCAATATCCTCTGCCCTGACCGGGTTGATGGAGAAAGCTACACTCTTGGGAGACAAGTACCACTCGAATCAAGCTCGTACAATCAACTTCCTTGGACTTTCAATCCTTCTCTTTGGCATTTTCGTTGATTTTTCCCTTGTGTTTGCTCGTTATGTGTGA 675 0.4296 MDATGRVMFRRSTSGLTVLAHSFGILSLILLLFWLLHYRGGLNLESDISERIFNVHPFMMFFGLIFLSGEGMMAYKTIAAEKPVQKFIHMLLHLIAICMGIIGIHAVLKFHNKENIEDFYSLHSWVGIATFSIFLLQWLVGFVLFMFPKASPGTRARALPWHICGGRALLYMAISSALTGLMEKATLLGDKYHSNQARTINFLGLSILLFGIFVDFSLVFARYV* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0606 224 ProSiteProfiles Cytochrome b561 domain profile. 19 219 IPR006593 -
Vvi1g0606 224 Gene3D - 10 222 - -
Vvi1g0606 224 FunFam Probable transmembrane ascorbate ferrireductase 3 10 222 - -
Vvi1g0606 224 PANTHER CYTOCHROME B561-RELATED 15 219 IPR043205 GO:0016491
Vvi1g0606 224 SMART 561_7 55 181 IPR006593 -
Vvi1g0606 224 CDD Cyt_b561_ACYB-1_like 46 189 - -
Vvi1g0606 224 Pfam Eukaryotic cytochrome b561 55 186 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0606 Vvi-Chr1 6034432 6035566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0606 1 223 Chloroplast and Mitochondria Gene Families AT1G14730 51.786 3.47e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0606 K08360 - vvi:100244034 435.647