Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0605 ATGGCAGCTAAAGGTTCAAGCTTTCAAATCACAGCAACACCGGTCACGCTGTTTGCTCATTTGTTACTCATAGCAGTGACCACTCTTGTGCTTGTTTGGCTTCTACATTTTCAAGGCGGCCTCGCCTTCAAATCCGGCGACAATGACAAGATCTTCAATTTGCACCCGTTTTTAATGATAGTTGGCTTTATCATGATTGCAGGAGAAGCTATCATGTCATACAAGACAGTCCCAGGAACAAAAAGAACACAGAAATTGGTTCACCTGATATTGCATTTTATCGCTCTTGGGGCTGGAATTTTCGGGGTTTATATAGCTTTCAGGTATCACGACAAGGAATCCATACCAGACATGTACACCCTGCATTCCTGGCTGGGGTTGAGCACCATCTGCTTATTTGGTTTGCAGTGGGTGTTTGCATTCTTCTCTTTCTGGTTCCCGGGTGCAGAAATGCCTACAAGGGGTAGGCTCATGCCATGGCACTGGTTTGCTGGCATGGTCATCTTTCTCATGGCCATATTGACTGCGGAGACGGGTTTGGTTCAGAGATTCAAGGATTTGGAGCTCAAGCCCGGCCAAGAAGCACTTATAGTGAACTTCACCGGCCTGTTGATCCTCCTATTCGCCATTGCTGTTAGTCTCAGTGTTATCCTACCGCGGGGTTATTAA 669 0.4649 MAAKGSSFQITATPVTLFAHLLLIAVTTLVLVWLLHFQGGLAFKSGDNDKIFNLHPFLMIVGFIMIAGEAIMSYKTVPGTKRTQKLVHLILHFIALGAGIFGVYIAFRYHDKESIPDMYTLHSWLGLSTICLFGLQWVFAFFSFWFPGAEMPTRGRLMPWHWFAGMVIFLMAILTAETGLVQRFKDLELKPGQEALIVNFTGLLILLFAIAVSLSVILPRGY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0605 222 SMART 561_7 54 180 IPR006593 -
Vvi1g0605 222 Gene3D - 7 221 - -
Vvi1g0605 222 PANTHER CYTOCHROME B561-RELATED 9 218 IPR043205 GO:0016491
Vvi1g0605 222 CDD Cyt_b561_ACYB-1_like 45 188 - -
Vvi1g0605 222 FunFam Cytochrome b reductase 1 9 221 - -
Vvi1g0605 222 Pfam Eukaryotic cytochrome b561 54 182 IPR006593 -
Vvi1g0605 222 ProSiteProfiles Cytochrome b561 domain profile. 18 217 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0605 Vvi-Chr1 6028424 6029565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0605 4 215 Chloroplast and Mitochondria Gene Families AT4G25570 42.593 1.60e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0605 K08360 - vvi:100262850 443.736