Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0604 ATGCTCAGATACATTGCATGCATTTATGTCTGTGATGACACTGTTTGCTCTCTTCTTCAGGTGCACCCGCTTTTAATGATAGTTGGCTTTATCATGATTGGAGGAGAAGCTATCATGTCATGTAAGGCAGTTCAGGGAAAAAGAAGGGCACCGATACTGGTTCACCTGATATTGCATTTTATCGCTCTTGTGGCTGGAATCTTCGGGGTTTGTATGGCTTTCAGGTATCACCACGTGGAATCCATGCCAGATATGTACACCCTGCATTCCTGGCTGGGTTTGTGCACCATCTGCTTATTTGGTTTGCAGTGGATGTTTGCATTCTTCTCTTTCTGGTACCCGGGTGTAAAAAAGCCGAGAAGGCGTAGGCTCATGCCATGGCACTGGTTTGCTGGCATGGTCATCTTTCTCATGGCCATATTGACTGCGGAGACGGGTTTAGTTCAGAGATCCACTTATTTGCGCCGCCAAGAAGCACTTATAGTCAACTTCACCGGACTGTTGATCCTCCTATTTGCCACTGCAGTTGGTCTCAGTGTTATCCATCCCTCCTGTCTGCCACCCAAGTCGGGCTCAGACCCAGTGATATCCTTCCCCGAGCTTGTCATCGGTCTGGCTGATGTGGTCTTGACCAGTAATGATTCATGA 648 0.4784 MLRYIACIYVCDDTVCSLLQVHPLLMIVGFIMIGGEAIMSCKAVQGKRRAPILVHLILHFIALVAGIFGVCMAFRYHHVESMPDMYTLHSWLGLCTICLFGLQWMFAFFSFWYPGVKKPRRRRLMPWHWFAGMVIFLMAILTAETGLVQRSTYLRRQEALIVNFTGLLILLFATAVGLSVIHPSCLPPKSGSDPVISFPELVIGLADVVLTSNDS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0604 215 FunFam Cytochrome b reductase 1 7 190 - -
Vvi1g0604 215 Pfam Eukaryotic cytochrome b561 21 152 IPR006593 -
Vvi1g0604 215 Gene3D - 4 186 - -
Vvi1g0604 215 CDD Cyt_b561_ACYB-1_like 19 154 - -
Vvi1g0604 215 ProSiteProfiles Cytochrome b561 domain profile. 1 181 IPR006593 -
Vvi1g0604 215 PANTHER CYTOCHROME B561-RELATED 18 183 IPR043205 GO:0016491
Vvi1g0604 215 SMART 561_7 21 147 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0604 Vvi-Chr1 6024539 6025551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0604 2 197 Chloroplast and Mitochondria Gene Families AT5G38630 36.275 1.99e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0604 K08360 - vvi:100268001 401.749