Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0591 ATGGTTGGATGCAGAATCCTTTTAAAGAATAAAGCAGATTGGCTGAGCACACTTCTTCATAGCAAGTTCTTCGATACATGCGGCGATCACCGTGATCTCCGGAAAAGTGAAAAAAATGTGTTTTGCATTGACTGTAATCTTTGCTTCTGTAAGCACTGTGTTACTTCTTCTGGGCATTGCCTCCATCGGCGCCTTAAGATCTGCAAATATGTCTATCATGATGTGGTTCGTCTTCAAGACATGCAGCAGCATCTTGATTGTTCTAAAATTCAGACATATAAAATCAATGGTGAAAAAGCTGTTCATCTGAATCCTCGTCCTCAATCCAAGGATTGTAAAGCATCTAAACCAAAAGGAGGTGCATCATGTGAAGCTTGTGGGAGATATATACAAGATCTCCCTAATCGCTTCTGCTCAATAGCATGCAAGGTTTTAATATTTGCAGAGAAGTTTAAAGACCACAACAGCAAGGTTGTCCCTTACCCAGTTCAGGAATTTGCTCACCTGTCTTTGAAGGAAAGCGTCGACATGGAAGTAAATTTGAAAGAAAAAGAATTGTCCTCCTCTTTGGCTGACTCACCTATGGAGATTGAAACCCAGACAAGTTCAGCATTGAAACCAAAGAAGCAATTGCACAAAAGGAAAGGCATTCCTAGAAGGTCCCCTCTCTTTTAA 675 0.4074 MVGCRILLKNKADWLSTLLHSKFFDTCGDHRDLRKSEKNVFCIDCNLCFCKHCVTSSGHCLHRRLKICKYVYHDVVRLQDMQQHLDCSKIQTYKINGEKAVHLNPRPQSKDCKASKPKGGASCEACGRYIQDLPNRFCSIACKVLIFAEKFKDHNSKVVPYPVQEFAHLSLKESVDMEVNLKEKELSSSLADSPMEIETQTSSALKPKKQLHKRKGIPRRSPLF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0591 224 MobiDBLite consensus disorder prediction 192 206 - -
Vvi1g0591 224 MobiDBLite consensus disorder prediction 186 224 - -
Vvi1g0591 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 223 - -
Vvi1g0591 224 ProSiteProfiles Zinc finger B-box type profile. 27 67 IPR000315 GO:0008270
Vvi1g0591 224 Pfam PLATZ transcription factor 69 144 IPR006734 -
Vvi1g0591 224 MobiDBLite consensus disorder prediction 207 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0591 Vvi-Chr1 5829740 5831755 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi1g0591 PLATZ 6.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0591 - - vvi:100247341 471.47