Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0158 ATGGCTAATCTCTTCCTTTGTTGTGATGATACTGTATTGTCACCATCTCCAGTTGAGGAATACGAGAGGTCGTGGGAGCAGAATGAGGAGCTGGGTCTTAACGATATGGACACTTCTTCAGCAGATGCCGGATACAACTGA 141 0.461 MANLFLCCDDTVLSPSPVEEYERSWEQNEELGLNDMDTSSADAGYN* 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0158 46 MobiDBLite consensus disorder prediction 31 46 - -
Vvi1g0158 46 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0158 Vvi-Chr1 1528522 1528662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0158 19 45 C2H2 Transcription Factor Family AT5G22480 88.889 1.81e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0158 K06874 - jre:118347647 63.1586