Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0120 ATGACCGGCTCTGAGCGCTATGAATCTCTTCGCCATTGCAGGTGGGTCGATGAGGTTATTCCTGATGCACCATGGGTGCTCACACAAGAGTTCATTGACAAACATGAGATTGATTATGTCGCACACGACTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAAGATGTCTATGAATTTGTTAAGTCCATTGGAAAGTTTAAGGAAACAAAACGTACAGATGGGATCTCTACATCAGATATAATAATGAGGATTGTTAAAGATTATAACCAGTATGTGATGCGTAACTTGGACCGTGGATATACAAGAAAGGATCTTGGTGTTAGCTATGTGAAGGAAAAGAGGCTGAGGGTGAACATGGGATTAAAAAAGCTGCACGAGAAAGTGAAGAAGCATCAAGAAAAAGTGGGAGAAAAGATACAAATAGTAGCCAAAACTGCTGGTATGCATAGAAATGAATGGGTGGAGAATGCTGATCGATTTGTTGCTGGATTTCTTGAGATGTTTGAAGAAAGTTGCCACAAAATGGGAACGGCCATTAGAGATAGAATTCAGGAGCAACTAAAGAGGCAGCAGTTAAGAGGGCTCCTATATGACAAAGAGGATGATGATGACGACGACAATGATGATTACTTCTATGATGACAGCACCGAAGAAGAAGAATACTACGAGAATGAAGATGAAAAATAA 690 0.4058 MTGSERYESLRHCRWVDEVIPDAPWVLTQEFIDKHEIDYVAHDSLPYADASGAGKDVYEFVKSIGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMGLKKLHEKVKKHQEKVGEKIQIVAKTAGMHRNEWVENADRFVAGFLEMFEESCHKMGTAIRDRIQEQLKRQQLRGLLYDKEDDDDDDNDDYFYDDSTEEEEYYENEDEK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0120 229 Pfam Cytidylyltransferase-like 4 83 IPR004821 GO:0003824|GO:0009058
Vvi1g0120 229 MobiDBLite consensus disorder prediction 196 229 - -
Vvi1g0120 229 PANTHER CYTIDYLYLTRANSFERASE 1 220 IPR045049 GO:0004105|GO:0006657
Vvi1g0120 229 Gene3D HUPs 1 171 IPR014729 -
Vvi1g0120 229 MobiDBLite consensus disorder prediction 200 229 - -
Vvi1g0120 229 SUPERFAMILY Nucleotidylyl transferase 2 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0120 Vvi-Chr1 1121664 1125058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0120 1 226 Acyl Lipid Metabolism Gene Families AT2G32260 73.894 6.95e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0120 K00968 - vvi:100245839 410.994