Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0102 ATGGGTTCAATGGGAGAAGTGGGTGATGAGATCCAACCAAGAGGCTATTGGAGATGGAGCAAACAAGATTTCTTACCAGAGGAGTCATTCAAAAACTGGGCCAGCTACCGCTCAGCGCTTTCCCAAACATGTTTTCGGTTCAAGGACCGCCTCACAAGCAGATCTGAAGATGCCATTGAGATTGGGGAGATGCGTAAACAAAGTGAGAATGACATGAAACGTTGCCTAACGTGGTGGGATCTTACCTGGTTCGGGTTTGGCTCAGTCATTGGAGCTGGTATCTTTGTGCTTACTGGCCAAGAAGCTCATGACCATGCTGGACCAGCCATAGTCCTGTCCTATGTGGCTTCAGGTGTTTCAGCACTGCTCTCTGTTTTCTGCTACACGGAATTTGCAGTAGAAATCCCAGTAGCTGGTGGCTCATTCGCGTACCTGAGAATAGAATTGGGAGACTTTGCAGCATTCATAACAGCTGGTAATATACTTCTTGAAAGTATTGTTGGAAGTGCAGGAGTTGCCAGGGCTTGGACTTCTTACTTCACAACCCTTCTGAACCGTCCCACCAACTCATTGAGAATCCACACAAATCTCACAAAGGGATACAACCTGCTGGACCCAATTGCTGTTGCAGTTCTGGCTATTGCTGCAACGCTTGCTATGATCAGCACCAGGAAGACTTCAGTCTTCAATTGGATCGCATCTGCTATAAATACTGTAGTGATTTTGTTTGTTATCATTGCAGGGTTTGCTAATGCTGACCCTTCAAATTTGACACCCTTTTTGCCTTACGGGGCTAAAGGGATCTTCCAAGCAGCTGCAATTGTATACTTTGCTTATGGAGGATTTGACAATATCGCCACCATGGCTGAAGAAACAAAAAACCCATCAAGAGATATACCATTAGGATTGCTCGGATCAATGTCAATCATCACTGTCATATATTGCTTAATGGCGCTTGCGCTCAGTATGATGCAGGACTACAGGGACATTGACAGACAAGCAGCTTACTCTCTTGCATTTCAAAGTGTGGGTATGAAGTGGGCCAAGTACCTGGTAGCTCTGGGTGCCCTGAAGGGGATGACCACTGTTCTTCTGGTTGGGGCACTTGGACAGGCACGATATGTTACTCATATCGCACGAGCCCACATGATCCCTCCATGGTTTGCTCTGGTGCACCCAAAAACAGGAACCCCTATAAATGCTACACTCTTGATTGTCATTTCAAGTGCCCTCATCGCTTTCTTTTCAAGCTTGGATGTCTTGGCAAGCTTGTTATCTGTGAGCACACTCTTCGTCTTCATGATGATGGCAGTAGCACTTCTTGTGAGGAGATACTATGTGACAGGGGTTACTCCACGTATCAACCTCTTGAAGCTAGTAATTTTCTTGCTGATAATTGTTGCTTCCTCCATGGGGACTTCAGCTTACTGGGGATTGAATCCCAATGGTTGGGTTGGTTATGCAATCACCATTCCTCTCTGGGTCCTGGGGACTGCAGGGATCTCAGTGTTTCTGCCCCAGCAGAGGACGCCAAAGGTTTGGGGGGTTCCACTTGTTCCATGGCTTCCATCCTTGTCGATTGCAACAAATCTCTTTCTCATGGGATCTCTGGAGTCTAAGGCTTTCATAAGATTCGGTGTCTGCACCGTTTTAATGCTGGTTTACTATGTTTTCTTTGGTCTCCATGCAACTTATGATGTGGCCCATCAACAACAAAAGCCAGAATCCTTGAAGTTTAATGATGGAGACATGGGAAAAACAGGGCCTTGA 1770 0.4627 MGSMGEVGDEIQPRGYWRWSKQDFLPEESFKNWASYRSALSQTCFRFKDRLTSRSEDAIEIGEMRKQSENDMKRCLTWWDLTWFGFGSVIGAGIFVLTGQEAHDHAGPAIVLSYVASGVSALLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAGNILLESIVGSAGVARAWTSYFTTLLNRPTNSLRIHTNLTKGYNLLDPIAVAVLAIAATLAMISTRKTSVFNWIASAINTVVILFVIIAGFANADPSNLTPFLPYGAKGIFQAAAIVYFAYGGFDNIATMAEETKNPSRDIPLGLLGSMSIITVIYCLMALALSMMQDYRDIDRQAAYSLAFQSVGMKWAKYLVALGALKGMTTVLLVGALGQARYVTHIARAHMIPPWFALVHPKTGTPINATLLIVISSALIAFFSSLDVLASLLSVSTLFVFMMMAVALLVRRYYVTGVTPRINLLKLVIFLLIIVASSMGTSAYWGLNPNGWVGYAITIPLWVLGTAGISVFLPQQRTPKVWGVPLVPWLPSLSIATNLFLMGSLESKAFIRFGVCTVLMLVYYVFFGLHATYDVAHQQQKPESLKFNDGDMGKTGP* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0102 589 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 63 565 - -
Vvi1g0102 589 Pfam C-terminus of AA_permease 514 563 IPR029485 -
Vvi1g0102 589 Gene3D Amino acid/polyamine transporter I 70 499 - -
Vvi1g0102 589 Pfam Amino acid permease 76 491 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi1g0102 589 FunFam Cationic amino acid transporter 5 70 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0102 Vvi-Chr1 985039 986808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0102 10 576 Organic Solute Cotransporters AT2G34960 78.169 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0102 - - vvi:100254353 1149.42