Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0036 ATGAGAGTTTTTGGGGCGAGTCTGTTGGCCATTTTGTGGGCTCTTGCCTGCATTGAAGGGGCAATATCACATGGGGATCAGCCTCTCGCTAAGATTGCTATTCACAATGCAAAATTTGCTCTTCATGATCAAGCTTATGTCAAAGCCTCTCCTACAGTTCTTGGATTGGGGGGACAAAATACAGAATTTGTGACTGTAGAGTTTAGCTCCCCAAGCCCATCAGTTGATGATTGGATTGGGGTATTTTCTCCTGCCAATTTCAGTGCTTCAACCTGTCTTCCAGAAGATATCCGGGTTACTCCTCCACTATTGTGTTCTGCGCCTATTAAGTATCAGTATGCAAATTACACCAGTCCTAACTACAAAAATACAGGGAAAGGATCATTGAAGCTTCAATTGATCAACCAGAGATCAGACTTCTCTTTTGCACTATTTTCTGGCGGATTAGTAAATCCGAAGCTGGTGGCAGTGTCAAATTCTGTAGCTTTTGCAAATCCTAATGCACCAGTTTACCCTCGTCTGGCACAAGGAAAAGTATGGAATGAGATGACTGTAACATGGACGAGTGGATACGGGATCAATGATGCAGCACCTTTCATTGAATGGGGTCTGAAAGGAGGAGACAAGGTGCGTTCCCCAGCTGGGACACTGACTTTTGATCGTAGGAGCATGTGTGGAGCACCAGCAAGCACAGTTGGTTGGCGTGATCCTGGATACATACATACTAGTTTCTTGAAGGAGTTGTGGCCGAACTTAGTGTATAGCTACAAGCTGGGGCATAGATTGTTCAATGGTACATATATTTGGAGTCAACAATACCAGTTTAGGGCTTCTCCTTATCCTGGTCAAAACTCTTTACAACGTGTTGTCATTTTTGGTGACATGGGAAAGGATGAGGCTGATGGTTCTAATGAATACAACCAATATCAGCGTGGCTCTCTTAACACTACTAAGCAGCTTATTGAAGATTTGAAGAACATTGATATTGTCTTCCACATTGGAGATATATGTTATGCAAATGGATACCTTTCACAGTGGGATCAATTTACTGCACAGGTTGAGTCAATTACCTCAACAGTGCCATACATGATTGCAAGTGGCAACCATGAGCGGGACTGGCCTGGAACAGGATCCTTCTATGGAAACCTGGATTCTGGAGGAGAATGTGGTGTGCTGGCTGAGACTATGTTCTATGTGCCTGCTGAGAACAGGGCTAAATTCTGGTACTCCACTGATTTTGGCATGTTCCGGTTCTGCATAGCTGACACAGAACATGATTGGAGAGAGGGAACAGAGCAATACAGGTTCATTGAGCACTGTCTAGCCTCTGTTGATAGACAGAAGCAACCATGGTTGATCTTTCTTGCACATCGTGTTCTTGGTTATTCTTCTTCCTCCTTTTATGCTGAAGAGGGATCCTTTGCTGAACCAATGGGAAGGGACGACCTTCAAAAACTTTGGCAGAAGTACAAGGTTGACATTGCCATGTATGGTCATGTGCACAATTATGAAAGGACTTGTCCCATTTATCAGAATATTTGCACTAATGAAGAGAAGCACTATTACAAGGGCACCTTGAATGGAACAATACATGTGGTTGCTGGTGGGGGAGGAGCAAGCCTTGCAGATTTCACCACCATCAACACCAAGTGGAGCATCTTCAAAGACTATGATTATGGGTTTGTAAAACTTACAGCATTTGATCATTCAAACCTGTTGTTTGAATACAAGAAGAGCAGGGATGGCAAGGTTTATGACTCTTTCAGAATATCCAGGGGTTACAGAGACATCTTGGCCTGCACTGTGGATAGCTGCCCAAGCAGCACCTTGGCATCTTGA 1839 0.4388 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQNTEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPNYKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVWNEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYIHTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEADGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTVPYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCIADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGRDDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGASLADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILACTVDSCPSSTLAS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0036 612 Gene3D - 168 281 - -
Vvi1g0036 612 Pfam Purple acid Phosphatase, N-terminal domain 175 276 IPR015914 GO:0003993|GO:0046872
Vvi1g0036 612 Pfam Calcineurin-like phosphoesterase 288 503 IPR004843 GO:0016787
Vvi1g0036 612 CDD MPP_PAPs 287 592 IPR041792 -
Vvi1g0036 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Vvi1g0036 612 SUPERFAMILY Metallo-dependent phosphatases 287 594 IPR029052 -
Vvi1g0036 612 SUPERFAMILY Purple acid phosphatase, N-terminal domain 147 279 IPR008963 GO:0003993|GO:0046872
Vvi1g0036 612 Pfam Iron/zinc purple acid phosphatase-like protein C 528 587 IPR025733 -
Vvi1g0036 612 Pfam Fn3-like domain from Purple Acid Phosphatase 47 165 IPR040974 -
Vvi1g0036 612 PANTHER PURPLE ACID PHOSPHATASE-RELATED 23 595 - -
Vvi1g0036 612 Gene3D - 282 595 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0036 Vvi-Chr1 464665 473684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0036 40 590 Miscellaneous Gene Families AT2G03450 30.148 2.54e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0036 K22390 - vvi:100252537 1279.62