Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0031 ATGGAGCATTTTGGTTTGAGGATGGAGAAGAACCCGAGAGATCTGTTGCAGAGGTTGATGGGGAACAGTGGAGAGCAGTCGCAGTACGCGTCCATGGTGAAGGGAGAGGATGACCCAGAAGAGATAGAGTTGAATCTTGGGCTGTCACTGGGTGGGAGATTCGGAGTGGACAAGAGCGAGAAGAAGCTAATGAGGTCGTCTTCAATTGCTGGTTCGATAGGGATAACGAGGGACGAGGATGCGCTGGTGACTCCCGCTGTTTCGTACTCTAGTCTGATGAGGACTTCTTCACTTCCGACTGAGACCCAAGAAGAGTGGAGGAAGAGGAAGGAGTTGCAGACACTGAGGCGGATGGAGGCCAAGAGGAGGCGCTCCGAGAAGCAGAGGAATAAGGAGGGCTGTGTCGAGGATGAAAAGCGCGATTTAGATAGCCCAATTGTGGGTTTCAGATCAAACATTGAGAAAGCACATCACTATGTGGCCGCCAATAGGTCGGCTGCTGCATTTGGGTTCCCCACTTGGGCGGCGGCGGCTGCTGCTGCGAAAGGGAAGGGTAGTGGTAGTTTACAAAACTTCGTGCAGCAGACTTCCCAGGGCTCGGGAGAATCCCAAGGGGGGAGCTCTTCAAGCATGTCGGAATTGGAGAGCAAGCCTCTTCAAGGGTACAGCAGCTGTGGCGAAGCGAGAAGCCTTGCTTGCAATCAGTCATTGCAAGAGCAAAGCATTCAGGAGGCCTCAGGTTCTTCCAGGACAAAGCCAAATGAAGGTACAGGCAGAACTTCTGGAGCTGAGATGGAGAATCCATCTAAGAATCCTGGTTTATCAGAAAATAGAGGGAGGGGAAGTGGGATGAATTTTATGGGGGATATGCCTTGTGTTTTTACGAGGGGAGACGGTCCAAATGGAAGAAGAATAGAAGGAATTCTATATAAGTATGGAAAGGGGGAGGAAGTGAGAATAATGTGTGTATGCCATGGTAGCTTTCTGTCCCCAGCAGAGTTTGTGAAGCATGCTGGTGGGGGTGATGTTGCCCACCCACTTAGGCATATAGTTGTAAACCCCTCCTCTGCTTCTTTCGTATAA 1083 0.5078 MEHFGLRMEKNPRDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGSIGITRDEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQRNKEGCVEDEKRDLDSPIVGFRSNIEKAHHYVAANRSAAAFGFPTWAAAAAAAKGKGSGSLQNFVQQTSQGSGESQGGSSSSMSELESKPLQGYSSCGEARSLACNQSLQEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFTRGDGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHIVVNPSSASFV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0031 360 PANTHER AFP HOMOLOG 2 12 356 IPR031307 GO:0007165
Vvi1g0031 360 MobiDBLite consensus disorder prediction 236 278 - -
Vvi1g0031 360 MobiDBLite consensus disorder prediction 236 282 - -
Vvi1g0031 360 Pfam Putative nuclear localisation signal 92 216 IPR032310 -
Vvi1g0031 360 MobiDBLite consensus disorder prediction 118 139 - -
Vvi1g0031 360 Coils Coil 108 128 - -
Vvi1g0031 360 MobiDBLite consensus disorder prediction 190 223 - -
Vvi1g0031 360 Pfam Ethylene-responsive binding factor-associated repression 37 71 IPR012463 -
Vvi1g0031 360 MobiDBLite consensus disorder prediction 190 219 - -
Vvi1g0031 360 Pfam Tify domain binding domain 318 352 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0031 Vvi-Chr1 434039 439421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0031 - - vvi:100245623 656.366