Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0028 ATGGGAAACGCATTCGCCTGCCTGTCATCTCATCAGAAAGCGGTTTCAAAGAAGCGCTCCAAGCGAGCACCAAGGCCTGCTGGACCACTCCCCACCTCCCTCAGCCAAAGAAGGAATGCAACAGTGTCACCTTCGCCGTCGAGGAGGAAGAACGATAACAGACTGGACGACGACGCTTTGATTCGACAGCAAGCGGTGGCTGCAGCTATCCTCTTTCGCCAACACCAGAGGAGCAATTCCATGACATTTGACCGATCAAACTCGGTCGTATATCCAATTCCAGCCCCATCTTGGAACAAACACAGCAACTTGCCCCGCAGTGCAAGTACTAGAACTGGGTCTTTCTCAGACTCCCCTCTTAAACCCCATCAGCTCCTCACAAAGGATCTGAAGTTAGATGAGTTGGAGACCAAACATTTTGTCCTTGTCCATGGAGGTGGTTTTGGAGCTTGGTGTTGGTACAAAACCATAGCACTTCTAGAAGAAGCTGGATTTGAAGTTGATACAGTAGACTTAATGGGCTCTGGAATTCACTCATCTGATACCAACAGCATCACCAGCCTAGCACTATACGTAAAGCCCCTCACTGATTTCCTTGGAAAACTTGCAGATGGAAAGGTGATTTTAGTGGGGCATGACTTTGGTGGTGCTTGCATCTCATACGCCATGGAGCTGTTTCCTTCTAAAGTTGCGAAGGCTATTTTCATTGCTGCAGCAATGCTGACTAATGGACAGAGCACCCTTGATATGTTTACCCAACAGACCGGCATGAACGATCTGATGCGCAAAGCTCAAATATTTCTTTATGCCAATGGGAAGGATCAACCCCCGACTGCCATTGACCTAGACAAAACATTGTTGAAAGACTTGCTGTTCAATCAATGTACTGCTAAGGATGTTGCATTGGCATCAGTATCAATGAGGCCAACCCCCATTGCACCTGTTTGGGAGAAGCTGTCTCTTTCTGATGCCAAGTACGGCTCTGTCCAGAGATTTTATATAAAAACTCAAGAAGATTGCGCCTTACCCAGTCTTCTGCAAGAGATCATAATAAGCTCGAATCCCCCAGAACAGGTTTTCCAGCTTAAAGGCTCTGATCATTCGCCCTTCTTCTCGAAGCCTCAGTCCCTTCACAGGCTCTTAGTGGAGATATCAAAGATTCCACCAAAGCGAGTCTGA 1179 0.4741 MGNAFACLSSHQKAVSKKRSKRAPRPAGPLPTSLSQRRNATVSPSPSRRKNDNRLDDDALIRQQAVAAAILFRQHQRSNSMTFDRSNSVVYPIPAPSWNKHSNLPRSASTRTGSFSDSPLKPHQLLTKDLKLDELETKHFVLVHGGGFGAWCWYKTIALLEEAGFEVDTVDLMGSGIHSSDTNSITSLALYVKPLTDFLGKLADGKVILVGHDFGGACISYAMELFPSKVAKAIFIAAAMLTNGQSTLDMFTQQTGMNDLMRKAQIFLYANGKDQPPTAIDLDKTLLKDLLFNQCTAKDVALASVSMRPTPIAPVWEKLSLSDAKYGSVQRFYIKTQEDCALPSLLQEIIISSNPPEQVFQLKGSDHSPFFSKPQSLHRLLVEISKIPPKRV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0028 392 Gene3D alpha/beta hydrolase 132 386 IPR029058 -
Vvi1g0028 392 FunFam putative methylesterase 11, chloroplastic 134 387 - -
Vvi1g0028 392 SUPERFAMILY alpha/beta-Hydrolases 138 383 IPR029058 -
Vvi1g0028 392 PANTHER METHYLESTERASE FAMILY MEMBER 137 385 IPR045889 -
Vvi1g0028 392 Pfam Alpha/beta hydrolase family 140 375 IPR000073 -
Vvi1g0028 392 MobiDBLite consensus disorder prediction 1 55 - -
Vvi1g0028 392 MobiDBLite consensus disorder prediction 32 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0028 Vvi-Chr1 397554 400150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0028 52 206 Miscellaneous Gene Families AT3G29770 56.688 4.36e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0028 - - vvi:100262720 768.459