Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0027 ATGGGTCGAGGAGTCAGCAGTGGTGGAGGACAGAGTTCATTGGGCTACCTTTTTGGGAGTGGAGAGGCTCCCAAACCGGCGCCAAACAATGCCCCAGCTTCTTCTAGCGAAGGACCAGCTGCTAATACTGGGGCTTCCACCAAGCCCATTGCTGCAGCTCAACCAACAGATGTTACTAAGCAGATACCTGCAGGTATCAATAGTAACACTGCAAACAACTACCACCGGGCGGATGGCCAGAACTGTGGCAACTTCATCACAGGTCGTCCCTCAACTAAGGTCCACTCTGCACCTGGTGGTGGATCATCTTTGGATTACCTCTTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGCTAGTGGTGGTGGTGCTAGTGGTGGTGGTGGTAAATGA 396 0.5404 MGRGVSSGGGQSSLGYLFGSGEAPKPAPNNAPASSSEGPAANTGASTKPIAAAQPTDVTKQIPAGINSNTANNYHRADGQNCGNFITGRPSTKVHSAPGGGSSLDYLFGGGGGGGGGGGASGGGASGGGGK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0027 131 MobiDBLite consensus disorder prediction 29 75 - -
Vvi1g0027 131 MobiDBLite consensus disorder prediction 1 75 - -
Vvi1g0027 131 MobiDBLite consensus disorder prediction 109 131 - -
Vvi1g0027 131 PANTHER SPR1 1 109 IPR039613 GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0027 Vvi-Chr1 391167 394070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0027 K18635 - vvi:100257592 181.03