Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0019 ATGAACATTTTCAAGCAGCTAGCTTCCACCAGATGTGGGTTTAATGGTGGAATGAAGTCTTGTAGAGCAACATGTGTCTCTCTCCTCCATTCATCCTCAGGTACATCGGTGGAAGTACATTCCCAAGACCAGGAAGTAGTAATTGCTCTAGGAAGCAATGTGGGCAATAGAGTTGACAATTTCAATGAGGCCTTGCAGCTAATGAAGAAGTCAGGCATGCACATAACTAGACATGGATGTTTGTATGAGACAGAGCCTGTCTATGTGACTGATCAACCTCTCTTTCTCAACTCTGCTGTTAGAGGTATTACAAAACTTGGTCCCCATGAACTACTCAGAGTTCTGAAGAAAATTGAAAAGGATATGGGTCGGACTGATGGAATAAGGTATGGTCCGAGACCAATTGACCTGGATATTTTGTTCTATGGGAAGTTCAGGGTTAACTCTGAGATTCTTACCATCCCCCATGAAAGAATTTGGGAGAGACCTTTTGTGATGGCCCCATTGATGGATGTAATGGGATCAGCTATGGAGAGTGATACGGTTGCATCCTGGCATTCTTTTTCAAAACTTAGTGGGGGACTATTTGAGTCATGGGAGAAACTTGGTGGCGAATCCCTCATTGGAAAGAACGGGTTGAAAAGGGTTTTACCCACTGGAAATGTTTTATGGGACTGGTCACTGAAAACCTCTATGATGGGTATCCTTAATCTGACCCCAGATAGTTTTAGTGATGGAGGGAAGTTCCAGTCTGTGGAGGCTGCAGTTTCTCAGGTCCGCTTGATGATCTTAGAAGGGGCAGATATTATTGATATTGGTGCACAGTCCACACGCCCAATGGCATCTAGGCTTTCAGCTCAAGAGGAATTAGATAGGTTAATCCCTGTCTTGGATGCTGTTCTAAAGATGCCTGAGGTAGAGGGGAAGCTGTTATCTGTGGATACTTTTCATTCTGAAGTTGCTTCAGAAGCAATTGGCAAGGGAGCTCATATTGTAAATGATGTATCTGCAGGACAGCTAGATCCTAACATGCTTGATGTTGTTGCCAGCCTTAAGGTTCCATATGTTGCTATGCACATGAGGGGGAACCCATCTACCATGCAGAATAGCGAGAACCTGCAATACGATAATGTTTGCGAGCAGGTTGCCTCTGAGTTATACTTGCGAGTTAGAGATGCTGAATTATCTGGTATTCCAGCCTGGAGGATAATTATTGACCCTGGAATTGGATTCTCAAAGAACACTGAACATAATTTGGACATTCTCATGGGGTTGCCAAACATACGAATGGAGCTTGCAGGGAAGAGTTTGGCTCTCTCTCATGCTCCTATGTTGATTGGACCCTCGAGGAAGAGATTTTTAGGTGATATTTGTGCTCGCCCTGCTGCAGCTGAGAGAGACCCTGCAACCATTGCTGCTGTGACTGCTGGGGTTTTGGGCGGTGCAAACATTGTTAGGGCACATAATGTCAAAGATAATTTAGATGCTGTGAAGCTCTGTGATGCAATGGTGAAGCGTGAGAGATCTCAGGCATGA 1536 0.4453 MNIFKQLASTRCGFNGGMKSCRATCVSLLHSSSGTSVEVHSQDQEVVIALGSNVGNRVDNFNEALQLMKKSGMHITRHGCLYETEPVYVTDQPLFLNSAVRGITKLGPHELLRVLKKIEKDMGRTDGIRYGPRPIDLDILFYGKFRVNSEILTIPHERIWERPFVMAPLMDVMGSAMESDTVASWHSFSKLSGGLFESWEKLGGESLIGKNGLKRVLPTGNVLWDWSLKTSMMGILNLTPDSFSDGGKFQSVEAAVSQVRLMILEGADIIDIGAQSTRPMASRLSAQEELDRLIPVLDAVLKMPEVEGKLLSVDTFHSEVASEAIGKGAHIVNDVSAGQLDPNMLDVVASLKVPYVAMHMRGNPSTMQNSENLQYDNVCEQVASELYLRVRDAELSGIPAWRIIIDPGIGFSKNTEHNLDILMGLPNIRMELAGKSLALSHAPMLIGPSRKRFLGDICARPAAAERDPATIAAVTAGVLGGANIVRAHNVKDNLDAVKLCDAMVKRERSQA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0019 511 CDD DHPS 230 501 IPR006390 GO:0004156|GO:0009396
Vvi1g0019 511 FunFam Dihydropteroate synthase 217 508 - -
Vvi1g0019 511 ProSitePatterns Dihydropteroate synthase signature 1. 232 247 IPR000489 GO:0042558
Vvi1g0019 511 Gene3D - 43 190 IPR035907 -
Vvi1g0019 511 ProSiteProfiles Pterin-binding domain profile. 230 498 IPR000489 GO:0042558
Vvi1g0019 511 NCBIfam 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 46 172 IPR000550 GO:0003848|GO:0009396
Vvi1g0019 511 PANTHER FOLATE SYNTHESIS PROTEINS 32 505 IPR045031 GO:0004156|GO:0009396
Vvi1g0019 511 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 47 173 IPR000550 GO:0003848|GO:0009396
Vvi1g0019 511 Gene3D - 211 509 IPR011005 GO:0044237
Vvi1g0019 511 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 46 177 IPR035907 -
Vvi1g0019 511 ProSitePatterns 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 129 140 IPR000550 GO:0003848|GO:0009396
Vvi1g0019 511 CDD HPPK 46 172 IPR000550 GO:0003848|GO:0009396
Vvi1g0019 511 Pfam Pterin binding enzyme 233 488 IPR000489 GO:0042558
Vvi1g0019 511 SUPERFAMILY Dihydropteroate synthetase-like 219 505 IPR011005 GO:0044237
Vvi1g0019 511 ProSitePatterns Dihydropteroate synthase signature 2. 266 279 IPR000489 GO:0042558
Vvi1g0019 511 FunFam Folate synthesis bifunctional protein 43 192 - -
Vvi1g0019 511 NCBIfam dihydropteroate synthase 232 502 IPR006390 GO:0004156|GO:0009396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0019 K13941 - vvi:100252672 1013.06