Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0015 ATGGCGGCAGCGTCCGTGAAACCCGCACTTCTTTTGAAAGATGAGCTCGATATCGTGATACCCACGATCCGGAACCTGGATTTTCTGGAGATGTGGAGGCCCTTTTTTGAGCCATACCATCTGATCATTGTTCAAGATGGTGATCCATCGAAGACCATCAAGGTCCCGGAAGGATTCGACTACGAGCTCTACAACCGCAACGACATCAACAGGATTCTGGGTCCCAAGGCCTCTTGTATCTCCTTCAAGGACTCTGCTTGTCGCTGCTTTGGCTACATGGTCTCCAAGAAGAAGTACATCTTTACCATCGACGACGATTGCTTCGTTGCCAAAGACCCATCTGGCAAAGATATCAATGCGCTTGAGCAGCACATAAAGAACCTCCTCACTCCATCAACTCCATTTTTCTTTAACACTCTTTATGATCCATACAGAGATGGTGCAGACTTTGTCCGTGGGTATCCTTTCAGTCTCCGTGAGGGTGTTCCCACTGCTGTTTCTCATGGTCTCTGGCTCAACATCCCTGATTATGATGCTCCCACCCAGCTTGTCAAACCCCGTGAGCGAAACACCAGGTATGTAGATGCTGTTTTGACAGTTCCAAAGGGTACCTTGTTCCCCATGTGTGGTATGAATCTGGCATTCAACCGTGAACTGATTGGACCTGCAATGTACTTTGGACTCATGGGTGATGGTCAGCCAATTGGCCGTTATGATGATATGTGGGCTGGCTGGTGCATGAAGGTGATATGTGACCATTTGGGATGGGGTGTCAAGACTGGTCTGCCCTACATATGGCACAGCAAAGCAAGCAATCCATTTGTTAACCTCAAAAAGGAGTACAGTGGCATCTACTGGCAAGAAGAGCTGATCCCATTCTTCCAAGCCGCAACACTTCCAAAGGAATGCACCACTGTTCAACAATGCTACCTTGAACTCTCCAAACAGGTCAAGGCTAAGCTTGAGAAGGTTGATCCATACTTCGTTAAGCTAGCAGATGCCATGATCACATGGATCGAAGCTTGGGATGAGCTCAACCCATCTGCTGGAGATTCTGCTAACCTGACCAACGGTTCTGCCAAGTAG 1086 0.4825 MAAASVKPALLLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKDINALEQHIKNLLTPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLGWGVKTGLPYIWHSKASNPFVNLKKEYSGIYWQEELIPFFQAATLPKECTTVQQCYLELSKQVKAKLEKVDPYFVKLADAMITWIEAWDELNPSAGDSANLTNGSAK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0015 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 37 248 IPR029044 -
Vvi1g0015 361 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Vvi1g0015 361 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Vvi1g0015 361 PANTHER UDP-ARABINOSE MUTASE 7 348 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0015 Vvi-Chr1 259039 261823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0015 K13379 - vvi:100256140 761.525