Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1442 ATGCCAATTCATTGGTATCTTTGTGTCATTGACTTTAAGAACTCTCATATCCAAATTTTGGATTCATTACGATCAAGGAGTCGGGACGAGTTTCGGTTTAAGAATGTCAAAACAGTGGTTGAATTTTGTCAAACGTTCTTCAAACTCTATGACATAGGGAAAGATATCTTCCAATTCTCCATTAATTGGGTTCCTTCGATTCCAACCCAAGATAATGGGTTAGTATGA 228 0.364 MPIHWYLCVIDFKNSHIQILDSLRSRSRDEFRFKNVKTVVEFCQTFFKLYDIGKDIFQFSINWVPSIPTQDNGLV* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1442 75 Pfam Ulp1 protease family, C-terminal catalytic domain 3 73 IPR003653 GO:0006508|GO:0008234
Vvi19g1442 75 Gene3D Adenoviral Proteinase; Chain A 2 74 - -
Vvi19g1442 75 SUPERFAMILY Cysteine proteinases 3 73 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1442 Vvi-Chr19 23998556 23998852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1442 - K18596 vvi:104881229 136.732