Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1419 ATGGCAGCGGTAGTGGGAAGTAGGAAGTGGCCTCTGACTGGTGGCCTTCCCTGCAAACTTTCCTTTGCTGCAGATAATGGGCTTGAGAGAATGTATATAGCAGGTTATCAAGATGGATCTGTTCGAATTTGGGATGCCACATACTTAGCCTTGTCACTTGTTTTTGCTTTCAAATATGAGGTGAAAGGTATCGAAGTTGCTGGTGTAGGCGCATCAGTATCAGCATTGGATTTTTGCTCCCTCAACTTAAGCTTAGCCATTGGCAATGAATGTGGTCTAATTCATCTATATAAGCTACTTGGGAGTTCAGATGACACAAATTTGCATTTTGTCATAGAAACTGAACATGAAGTCCACAAGTTGCATCAAGAGAATGAACCTTAA 384 0.4193 MAAVVGSRKWPLTGGLPCKLSFAADNGLERMYIAGYQDGSVRIWDATYLALSLVFAFKYEVKGIEVAGVGASVSALDFCSLNLSLAIGNECGLIHLYKLLGSSDDTNLHFVIETEHEVHKLHQENEP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1419 127 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 8 122 - -
Vvi19g1419 127 SUPERFAMILY WD40 repeat-like 16 100 IPR036322 GO:0005515
Vvi19g1419 127 Gene3D - 8 125 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1419 Vvi-Chr19 23490155 23490538 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1419 K08518 - vvi:100250143 240.736