Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1417 ATGGCAGCTTATTTGAAGCTTCTCACAACCACTATGTATGATGGAGTAAGTGGGGTTAAAGATCACATCATCAAGGTAAAGCACTACTTCAACAAGGTAAATGAGATGAAAGTGGAGTTGAGTGAGAAATTCTTGAAATGGTTGATACTTGAGTATCTTCCTACTTCCTTTGATGCAGTGAAGTTGACTTATAAGGCCTTGAAGGAATAA 210 0.3762 MAAYLKLLTTTMYDGVSGVKDHIIKVKHYFNKVNEMKVELSEKFLKWLILEYLPTSFDAVKLTYKALKE* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1417 69 Pfam gag-polypeptide of LTR copia-type 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1417 Vvi-Chr19 23481816 23482025 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1417 - K00705 vvi:104877801 140.584