Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1414 ATGGCAGATCCAACCCCTCTCCTCTCCCAATCCCACTTGGCCGACCCAGAACCTATGCTCATTCCCAAACACCTCCCATCCCTCGACGAAACTTTCGAGCGATACATAGGAGATTTTGGGTGGGCTCAGCTTCTTCAAGCCTTCCTTGTGTCTTTTGCCTGGGTCTTTGATGCGCAACAAACCTTCATCAGCTTATTTACTGATGCTGAGCCTCCTTGGCACTGCACTGAACTCGGCACAGAGCTATGCACTTCCGTTTCTAACATCTGTCAGCTTCCCAAGGGCTCATGGGCGTGGGACCGAGCAGCGGACACCTCGATTGTATCGGAATGGACCCTTGTGTGTGCCGGTTCCATCATCAAGAGCCTCCCTGCGTCTTCCTTCTTCATGGGCTGCATGGTTGGTGGACTTGTTCTTGCCACACTCGCCGACTCATCCCTCGGCCGCAAAAACATGTTATTCTTTTCATGTCTCCTGATGTCAGCTACAGGGATTTTGACTATTTTCTCCCCAAATGTTTGGATCTACTCTGGGTTTAGATTCCTTTCTGGGTTTGGGCGTGCCACCATTGGAACATGTGCTATTGTGTTGTCGACAGAGCTCGTTGGAAAACGGTGGCGCAGCCAGGTGGGGGTATGCGGTTTCTTCCTTTTCACACTAGGGTTCTTGTCCCTACCAGCCATAGCTTACTTAAGCAGAGGTTCCTCATGGAGATATCTTTATCTGTGGACTTCTGTGCCGGCATTGTCGTATTGTGTTTTAGTCCATTTCTTCGTTCGTGAGTCTCCTAGATGGCTTTTGGTGCGTGGACGAAAAGAAGAAGCTGTGGCAACACTGAAAAGTATAGGGGCTGTAAACAATAGTAGCTTCACCTTAAGCTTCTCAGGCTTGCCCTTTGAAGATGAGGAAACTACAAATCTACATCTTTGCTCTGTGATAAGCATCCTGCTGGAGAAAAGATGGGCTTTGCGGCGATTATCTGCAGTCATGACAGTAGGATTTGGGGTGGGAATGGTGTACTATGGCATGCCGTTGGCGCTGGGAAACCTGCCTTTCAATCTCTACTGGAACGTCACTTTCAATGCCTTATCAGAGCTGCCCGCATCATTAATCGCTTTCTTCTTTATCGAGAGACTGAATAGGAAAAGTTCAGTGCTGGTTTTCACCATGACAAGTGGGGTTTGCAGTATCATGTGTGTGGTGATGGGTGAAGAATGGGCATCACTGAAGATTGGACTAGAACTGGTCTCATTCTTCAGCACATGCACCGCATTCGACATCTTACTAATATACACCATAGAGCTGTTTCCCACATGCGTTAGGAACTCGGCCATGGCGATGGTGAGGCAGGCGCTGGTGTTTGGGGGCGTGTTCTGCCCCGTTATAGTGGAAATCGGCATGGGAAACGGGTACTTGTCGTATGGAGTTTTCGGAGTAGTGATAATAAGCTGTGGGCTGTTTGTGGGATGCTTGCCAGAGACAAAGGGTGGGACACTTTGTGACACAATGGAGGAAGAAGAAAACAAGGAGAGAGCAGCACATCTTCACCACCCTACTCACAAACACAAGCACAAGCTCACATACATGGCAGATTCAACCCCTCTCCTCTCTCAATCCCACCCGGCCGACCCAGAACCTCTACTCATCCCCAAACACCTCCCATCCCTCGACGAAACTTTCGAGCGATACATAGGAGATTTTGGGTGGGCTCAGCTTCTTCAAGCCTTCCTTGTGTCTTTTGCCTGGGTCTTTGATGCTCAACAAACCTTCATCAGCGTATTTACTGATGCTGAGCCTCCTTGGCACTGCACTGAACTCGGCACAGAGCTATGCACTTCCAGCCTCCCTGCGTCTTCCTTCTTCACGGGCTGCATGGTTGGTGGACTTGTTCTTGCCACACTCGCCGACTCATCCTTCGGCCGCAAAAACATGTTATTCTTTTCATGTCTCCTGATGTCAGCTACTGGGATTTTGACTATTTTCTCCCCAAATGTTTGGATCTACTCTGGGTTTAGATTCCTTTCTGGGTTTGGGCGTGCCACCATTGGAACATGTGCTATTGTGTTGTCGACAGAGCTCGTTGGAAAACGGTGGCGTAGCCAGGTGGGGGTATTCCATTTCTTCGTTCGTGAGTCTCCTAGATGGCTTTTGGTGCGTGGCCGCAAAGAAGAAGCGGTGGCAACACTGAAAAGTATAGGGGCTGTAAACAATAGTAGCTTCACCTTAAGCTTCTCAGGATTGCCCTTTGAAGAAGAGGAAACTACAAATCTACATCTTTACTCTGTGATAAGCATCCTGCTGGAGAAAAGATGGGCTTTGCGGCGATTATCTGCAGTCATGACAGTAGGATTTGGGGTGGGAATGGTGTACTATGGCATGCCGTTGGCGCTGGGAAACCTGCCTTTCAATCTCTACTGGAACGTTACTTTCAATGCCTTATCAGAGCTGCCCGCATCATTAATCGCTTTCTTCTTTATCGAGAGACTGAATAGGAAAAGTTCAGTGCTGGTTTTCACCATGACAAGTGGGGTTTGCAGTATCATGTGTGTGGTGATGGGTGAAGAATGGGCATCACTGAAGATTGGACTAGAACTGGTCTCATTCTTCAGCACATGCACCGCATTCGACATCTTACTAATATACACCATAGAGCTGTTTCCCACATGCGTTAGGAACTCGGCCATGGCGATGGTGAGGCAGGCGCTGGTGTTTGGGGGAGTGTTCTGCCCCGTTATAGTGGAAATCGGAAGGGGAAACGGGTACTTGTCGTATGGAGTTTTCGGAGTAGTGATAATAAGCTGTGGGCTGTTTGTGGGATGCTTGCCAGAGACAAAGGGTGGGACGCTTTGTGACACAATGGAGGAAGAAGAGAACAAGCAGAGAGCAGGCTCAGGATCAGGCACAGGCACAGGCACAGGCTCATCCTTGGCTTAA 2934 0.4918 MADPTPLLSQSHLADPEPMLIPKHLPSLDETFERYIGDFGWAQLLQAFLVSFAWVFDAQQTFISLFTDAEPPWHCTELGTELCTSVSNICQLPKGSWAWDRAADTSIVSEWTLVCAGSIIKSLPASSFFMGCMVGGLVLATLADSSLGRKNMLFFSCLLMSATGILTIFSPNVWIYSGFRFLSGFGRATIGTCAIVLSTELVGKRWRSQVGVCGFFLFTLGFLSLPAIAYLSRGSSWRYLYLWTSVPALSYCVLVHFFVRESPRWLLVRGRKEEAVATLKSIGAVNNSSFTLSFSGLPFEDEETTNLHLCSVISILLEKRWALRRLSAVMTVGFGVGMVYYGMPLALGNLPFNLYWNVTFNALSELPASLIAFFFIERLNRKSSVLVFTMTSGVCSIMCVVMGEEWASLKIGLELVSFFSTCTAFDILLIYTIELFPTCVRNSAMAMVRQALVFGGVFCPVIVEIGMGNGYLSYGVFGVVIISCGLFVGCLPETKGGTLCDTMEEEENKERAAHLHHPTHKHKHKLTYMADSTPLLSQSHPADPEPLLIPKHLPSLDETFERYIGDFGWAQLLQAFLVSFAWVFDAQQTFISVFTDAEPPWHCTELGTELCTSSLPASSFFTGCMVGGLVLATLADSSFGRKNMLFFSCLLMSATGILTIFSPNVWIYSGFRFLSGFGRATIGTCAIVLSTELVGKRWRSQVGVFHFFVRESPRWLLVRGRKEEAVATLKSIGAVNNSSFTLSFSGLPFEEEETTNLHLYSVISILLEKRWALRRLSAVMTVGFGVGMVYYGMPLALGNLPFNLYWNVTFNALSELPASLIAFFFIERLNRKSSVLVFTMTSGVCSIMCVVMGEEWASLKIGLELVSFFSTCTAFDILLIYTIELFPTCVRNSAMAMVRQALVFGGVFCPVIVEIGRGNGYLSYGVFGVVIISCGLFVGCLPETKGGTLCDTMEEEENKQRAGSGSGTGTGTGSSLA* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1414 977 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 495 IPR020846 GO:0022857
Vvi19g1414 977 MobiDBLite consensus disorder prediction 962 977 - -
Vvi19g1414 977 Pfam Sugar (and other) transporter 704 950 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi19g1414 977 Pfam Sugar (and other) transporter 121 500 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi19g1414 977 SUPERFAMILY MFS general substrate transporter 122 499 IPR036259 -
Vvi19g1414 977 CDD MFS_OCT_plant 87 492 - -
Vvi19g1414 977 Gene3D MFS general substrate transporter like domains 101 509 IPR036259 -
Vvi19g1414 977 Gene3D MFS general substrate transporter like domains 705 954 IPR036259 -
Vvi19g1414 977 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 39 505 - -
Vvi19g1414 977 MobiDBLite consensus disorder prediction 954 977 - -
Vvi19g1414 977 SUPERFAMILY MFS general substrate transporter 567 949 IPR036259 -
Vvi19g1414 977 Gene3D MFS general substrate transporter like domains 568 704 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1414 Vvi-Chr19 23424895 23432590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1414 529 961 Organic Solute Cotransporters AT1G79360 48.289 2.91e-162 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1414 - - vvi:100251788 1015.37