Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1412 ATGGCTTCCAGAGCTAGAAAGAAGCAGCAGAGATGGTGCACACAGCCTCTAACTCCTCTAATGGAGGGCCCAGATCCTGAAATGCAAGAAGAAGGAACCAAGAAGGAGAGTTCCTGGGAGGTCATCAGAGAATGGTTCCGCCTGCAGAAGGGTGGCGGCCTTGGGGTTCATGGAAGCAGTAGCTTCTCCCTCTCTTTATATGGAAACATCCCCTCCAAAACCCAAGACTTGAGGCTTCTGCTAGGCGTCCTGGGCTGCCCTCTCGCCCCCATCCCCCTCGCCACTGACCCACTTCACCGTCTCCATATCAAGGACATCCCCATAGAGACGTCGAGTGCCTGTTACATCATACAGCAGTACTTGGCGGCAACGGGGTGTCTGAAGCAAGAGAAGGGGATGAAAAATATGTACACCACGGGGACGATGAAGATGATATGCTGCGAAACGGAGATATCGACGGGGAAGAGTGTGAAGAGCTTGGGGACGAGGAGTGGGGAGAATGGGTGCTTTGTGCTCTGGCAAATGTCTCCCGGAATGTGGTCTCTGGAGCTGGTGGTGGGTTGCAACAAGGTCGTCGCCGGCAGTAACGGCAAGATCGTCTGGCGCCACACCCCTTGGCTCGGCACCCACGCCGCCAAAGGCCCCCACCGCCCTCTCCGGCGCATCATTCAGGGTTTGGATCCAAAGAGCACGGCTAGCCTGTTCGCCAAAGCCCAATGCTTGGGCGAGAAACGGATAGGAGAAGATGACTGCTTTGTCCTAAAGGTGGCGGCCGACCGGGCGGCAGTGATGGAGAGAAATGAAGGCCCTGCAGAGGTGATAAGGCACGTACTATATGGATACTTCAGCCAAAAGAGTGGCCTCCTAATATACCTAGAGGACTCACACCTCACAAGGGTTCAAGCTCCTGGAAATGACACAGTCTACTGGGAGACCACCATAGGAACCAGCCTGTGGGACTACCGGGACGTCGATGGCGTGATGATCGCGCACGAGGGGCGGACCATCGCCACGGTTTTTCGGTTTGGAGAGGTGTCCATGCAGCATAGCAGGACAAGGATGGAGGAGCTGTGGGTGATAGATGATGTAGTGTTCAATGTTCCTGGCCTCTCCTTTGATTACTTCATTCCTCCTGCTGATATTTTTGATGTTGATAACTCACCATGA 1167 0.5458 MASRARKKQQRWCTQPLTPLMEGPDPEMQEEGTKKESSWEVIREWFRLQKGGGLGVHGSSSFSLSLYGNIPSKTQDLRLLLGVLGCPLAPIPLATDPLHRLHIKDIPIETSSACYIIQQYLAATGCLKQEKGMKNMYTTGTMKMICCETEISTGKSVKSLGTRSGENGCFVLWQMSPGMWSLELVVGCNKVVAGSNGKIVWRHTPWLGTHAAKGPHRPLRRIIQGLDPKSTASLFAKAQCLGEKRIGEDDCFVLKVAADRAAVMERNEGPAEVIRHVLYGYFSQKSGLLIYLEDSHLTRVQAPGNDTVYWETTIGTSLWDYRDVDGVMIAHEGRTIATVFRFGEVSMQHSRTRMEELWVIDDVVFNVPGLSFDYFIPPADIFDVDNSP* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1412 388 PANTHER LIPASE 15 382 IPR006873 -
Vvi19g1412 388 MobiDBLite consensus disorder prediction 1 34 - -
Vvi19g1412 388 Pfam Protein of unknown function (DUF620) 136 378 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1412 Vvi-Chr19 23399297 23401415 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1412 - - vvi:100246643 797.349