Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g1410 | ATGGACACACAAAATCTTGTGGCTCGGCTGAATAGTTCAGGTCTACTTCGGAGCCAGTGCCTTATTGGAGGAAAATGGACTGAAGCTTATGATGGGAAGACCATACCGGTCCACAACCCTGCTACTGGTGATGTTTTAGTAAATGTTCCATGCATGGGAGGGCAGGAGACGAATGATGCGATATCTGTAGCTTATGAGGCATTCCTTTCTTGGAGCAAACTTACTGCTGCTGAAAGGAGCAAACGTCTGCGGAAATGGTATGATTTACTAATTGCCAATAAAGAAGAGCTTGGTCAAATCATAACACTAGAGCAAGGAAAACCCCTAAAAGAAGCCATTGGTGAGGTTAACTATGGGGCTGCCTTTATTGAGTTCTCTGCAGAGGAGGCAAAACGTATATATGGTGATATAATTCCATCACCACTAGCTGATCGTCGGCTGCTTGTTTTAAAGCAGCCTGTAGGTGTTGTTGGTGCAATTACTCCTTGGAACTTTCCATTGGCTATGATCACACGGAAGGTTGGTCCTGCCCTTGCTTGTGGCTGCACAGTGGTTATAAAACCTTCTGAACTTACACCATTGACAGCCTTAGCAGCAGCTGAGCTTGCCCTTCAAGCTGGAATACCACCGGGTGCTGTGAATGTGGTCTTTGGAAATGCTCCTGAAATTGGGGATGCTTTACTTGCAAGTCGGCAGGTAAGGAAGATCACATTTACAGGCTCAACAGCTGTCGGAAAGAAGTTGATGGCTGGTGCAGCTCAGACTGTTAAAAAGGTATCTCTGGAACTTGGTGGTAATGCACCTTGCATAATCTTTGACGATGCAGACCTGGAGGTGGCAGTAAAAGGGGCTCTTGGTACAAAGTTCCGTAACAGTGGACAAACATGTGTTTGTGCAAATAGAATACTTGTGCAGGAAGGTATTTATGAGAAATTTGCAATTGCTTTTTCACAAGCTGTCCAAAGTATGCAAGTTGGTGAAGGTTTTACTGAAGGTGTGGTCCAGGGTCCACTGATTAATGAGGCTGCAGTGCAGAAGGTTGAATCATTTGTTAAAGATGCTGTCTCAAAGGGAGCAAAAGTCCTTCTTGGGGGTAAAAGACACAGTCTGGGAATGACCTTCTATGAGCCAACGGTAATTGGTGACATCAAGAATGACATGCTTATTGCGAGGAATGAAGTGTTTGGACCTGTTGCACCCCTCTTGCGCTTTAAAACCGAGGAGGAAGCTATCCGCATTGCAAATGACACCAATGCTGGTTTAGCTGCTTATGTATTCACTGAAAACGTGCAACGTATGTGGCGTGTCACTGAAGCCCTTGAATATGGACTGGTTGGTGTCAATGAAGGATTGGTTTCAACAGAGGTGGCTCCATTTGGAGGAGTCAAGGAGTCTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGA | 1482 | 0.4494 | MDTQNLVARLNSSGLLRSQCLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAERSKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDIIPSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVRKITFTGSTAVGKKLMAGAAQTVKKVSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQTCVCANRILVQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAAYVFTENVQRMWRVTEALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVCFGNISSN* | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g1410 | 493 | FunFam | Succinate-semialdehyde dehydrogenase I | 32 | 275 | - | - | |
Vvi19g1410 | 493 | Pfam | Aldehyde dehydrogenase family | 26 | 485 | IPR015590 | GO:0016491 | |
Vvi19g1410 | 493 | CDD | ALDH_F5_SSADH_GabD | 37 | 487 | - | - | |
Vvi19g1410 | 493 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 32 | 479 | IPR016162 | GO:0016491 | |
Vvi19g1410 | 493 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 289 | 300 | IPR016160 | GO:0016491 | |
Vvi19g1410 | 493 | FunFam | Succinate-semialdehyde dehydrogenase I | 265 | 454 | - | - | |
Vvi19g1410 | 493 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 12 | 489 | - | - | |
Vvi19g1410 | 493 | SUPERFAMILY | ALDH-like | 15 | 489 | IPR016161 | GO:0016491 | |
Vvi19g1410 | 493 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 261 | 268 | IPR029510 | GO:0016491 | |
Vvi19g1410 | 493 | NCBIfam | succinate-semialdehyde dehydrogenase | 37 | 483 | IPR010102 | GO:0009013|GO:0009450 | |
Vvi19g1410 | 493 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 265 | 454 | IPR016163 | GO:0016620 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi19g1410 | Vvi-Chr19 | 23355570 | 23383396 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi19g1410 | 1 | 493 | Aldehyde Dehydrogenase Gene Family | AT1G79440 | 78.905 | 0.0 | 797 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g1410 | K17761 | - | vvi:100262240 | 953.355 |