Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1402 ATGGCCTCTGCCCCCACTCTCTGTATCACCGCCACTAACCTTCTCATTCTCCTCATTTTCTTCCTCCCTAGCTTAGTCTTGTCTGACTGCTCATGTGATGAAGCTGAGCACTCTGATCACCCCAGTAATGGAGGTGAATCACTCAAGTATAAGCTTGCTGCAATTGCCTCCATCCTTGTTGCAGGTGCAGCTGGGGTTAGCATCCCTCTACTGGGGAAGAAAGTCCCAGCTCTAAATCCCGAAAACCACATCTTCTTCATGATCAAGGCCTTTGCTGCAGGCGTGATTCTAGCCACTGGTTTCATTCACATACTTCCCGAGGCGTTTGAGAGGCTCACTTCGCCTTGCCTCGGGGAGAATCCTTGGGGGAAGTTCCCGTTCACCGGGCTTGTTGCCATGATGTCCGCTATAGGGACACTCATGGTGGACACTTTCGCGACGGGGTATTATAAGAGGCAGCACTTCAGCAAGCCTAAACAAGTGACTGCCGATGAGGAGAGGGGTCAGGAGCATGCAGGGCATGTGCATGTCCACACACATGCCACACATGGCCATGCCCATGGCTCGGCCAGCCCATCCGATGAGGAAAGCCTCTCCGACCTCATCAGACGCAGAATCGTCTCGCAAGTTAAGCACGCGATACTGACCCATGTGCTCGCCTCTGATTCCCCCCAGCTCGCCGGGTTGGTACTGGACCCGTTAGCCTCCGCCATGATCGACCTTGCCGCGGAGCTCGACGTCGCTTCTTATATCTACTTCCCCAGCGGAGCAGCAATGTTGGAACAAGTGCTTCGTTTCCCAGATCTCGATTCTCAAGTCAGTGAACTCCCTGCCACCGAGCGATTTCGGTCAACTCAGTGTTGA 864 0.5405 MASAPTLCITATNLLILLIFFLPSLVLSDCSCDEAEHSDHPSNGGESLKYKLAAIASILVAGAAGVSIPLLGKKVPALNPENHIFFMIKAFAAGVILATGFIHILPEAFERLTSPCLGENPWGKFPFTGLVAMMSAIGTLMVDTFATGYYKRQHFSKPKQVTADEERGQEHAGHVHVHTHATHGHAHGSASPSDEESLSDLIRRRIVSQVKHAILTHVLASDSPQLAGLVLDPLASAMIDLAAELDVASYIYFPSGAAMLEQVLRFPDLDSQVSELPATERFRSTQC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1402 287 Gene3D Glycogen Phosphorylase B; 125 286 - -
Vvi19g1402 287 PANTHER ZINC/IRON TRANSPORTER 47 202 - -
Vvi19g1402 287 Pfam ZIP Zinc transporter 49 183 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1402 Vvi-Chr19 23243553 23245828 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1402 8 210 Inorganic Solute Cotransporters AT3G12750 58.095 1.90e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1402 K14709 - vvi:100250216 480.715