Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1401 ATGGTTCTTTTCTTCTCCGTCACAACCCCAGTGGGAATAGTGCTAGGCATTGGAATATCAAGAATTTACCACGAAAATGGCCCAACTGCACTCATAGTTGAAGGGGTATTTGACGCGGCATCGGCTGGGATCTTGATATACATGGCGCTGGTGGATCTTCTAGCGGCGGACTTCATGAACCCGAGGCTGCAGAGCAGCCTGAGGCTCCAGTTAGGGGCAAATATCTCCCTTCTTTTAGGGACTGGCTGCATCAAACAAATGGAGCCAAAAGTGAAGTTTTCCCTTGATTTTTCCTCCCTTTTCTGTCAACATAAAGCAATGGAATCGCATGATGAAAAGGCTTTTTTCATGATTTTGTATGTGAATAAAGATACATACATAACCATAAGAAATGATTTGGATGCCCCTAGAAAGTTGTATTCCACGTTGGTTTTTGGCCCCTTAACATGCTCAAAAATGCCTCTCACCACCACCACCACCTTCCACATTCCATGGGCTTTTAGGGTTTTTTTTTCCTTGGTGAGAAACAACTACACGGACAATAATATAAACCTCAATTCTCACTTCCATCATCTCTAG 579 0.4352 MVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMALVDLLAADFMNPRLQSSLRLQLGANISLLLGTGCIKQMEPKVKFSLDFSSLFCQHKAMESHDEKAFFMILYVNKDTYITIRNDLDAPRKLYSTLVFGPLTCSKMPLTTTTTFHIPWAFRVFFSLVRNNYTDNNINLNSHFHHL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1401 192 PANTHER ZINC/IRON TRANSPORTER 1 81 - -
Vvi19g1401 192 Pfam ZIP Zinc transporter 1 83 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1401 Vvi-Chr19 23237784 23238509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1401 1 82 Inorganic Solute Cotransporters AT2G32270 64.634 8.42e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1401 K14709 - vvi:100263894 160.999