Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1399 ATGAAGTGGCTTGATGATCAACCGGTGGGGTCAGTGGTCTTCCTCTGCTTCGGGAGCAGGGGAGCTTTTGGTGTGGGTCAAGTTCATGAGATAGCGCATGGACTCGAGCACAGTGGATACAGGTTCTTGTGGTCCTTACGTCAGCCACCGAGGGTCAAACACCTTCCACCGTCAGATCATACGAATTTCGACGGAGTCTTGCCGGAGGGGTTCTTAGATCGAACAGCGGAGAAGGGCTTGGTTTGTGGGTGGGCCCCACAGTTTAAGATCCTGTACCATCCATCAATCGGAGGGTTCGTATCGCACGGTGGGTGGAACTCCATCATGGAGAGCTTGTGGTGCGGTGTACCGATTTTGGTGTGGCCTATATATGCAGAGCAAAAACTCAATAGGTATAGAATAGTGAGGGACTTGGGATTGGGTGTGGAGGTCACAGAGAACGATGAGGACATGAACGGCCGTGATTTGTTGATGGCTTACACGGACGGTGGACATTTGGTGAAGAGGGAGAAGGTGAAGGTAGCAGTGAAGGCGTTGATGGACGGTGAAAGTGAGGTGAGGAGGAAGGTGAAGCAGATGAGTGAGACGTGTAGGGAGACCGTGAGGGACGGTGGATCTTCATTTGCTTCATTGGGACAATTTATCACCGATCTTTTTGCTAGCATGAAGAAATAA 675 0.5111 MKWLDDQPVGSVVFLCFGSRGAFGVGQVHEIAHGLEHSGYRFLWSLRQPPRVKHLPPSDHTNFDGVLPEGFLDRTAEKGLVCGWAPQFKILYHPSIGGFVSHGGWNSIMESLWCGVPILVWPIYAEQKLNRYRIVRDLGLGVEVTENDEDMNGRDLLMAYTDGGHLVKREKVKVAVKALMDGESEVRRKVKQMSETCRETVRDGGSSFASLGQFITDLFASMKK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1399 224 CDD GT1_Gtf-like 1 218 IPR002213 GO:0008194
Vvi19g1399 224 Gene3D Glycogen Phosphorylase B; 1 202 - -
Vvi19g1399 224 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 217 - -
Vvi19g1399 224 PANTHER GLYCOSYLTRANSFERASE 1 217 - -
Vvi19g1399 224 FunFam Glycosyltransferase 1 199 - -
Vvi19g1399 224 ProSitePatterns UDP-glycosyltransferases signature. 84 127 IPR035595 -
Vvi19g1399 224 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 27 159 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1399 Vvi-Chr19 23202162 23202836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1399 1 219 Glycosyltransferase AT1G07260 50.685 3.02e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1399 - - vvi:104877795 462.611