Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1398 ATGGCCACTGCCCCCACTCTCTGTATCACCGCCACTAACCTTCTCATTCTCCTCATTTTCTTCCTCCCTAGCTTAGTCTTGTCTGACTGCTCATGTGATGAAGCTGAGCACTCTGATCACCCCATTAATGGAGGTGAATCACTCAAGTATAAGCTTGCTGCAATTGCCTCCATCCTTGTTGCAGGTGCAGCTGGGGTTAGCATCCCTCTGCTGGGGAAGAAAGTCCCAGCTCTAAATCCCGAAAACCACATCTTCTTCATGATCAAGGCCTTTGCTGCAGGCGTGATTCTAGCCACTGGTTTCATTCACATACTTCCCGAGGCGTTTGAGAGGCTCACTTCGCCTTGCCTCGGGGAGAATCCCTGGGGGAAGTTCCCGTTCACCGGGCTTGTTGCCATGATGTCCGCTATAGGGACACTCATGGTGGACACTTTCGCGACGGGGTATTATAAGAGGCAGCACTTCAGCAAGCCTAAACAAGTGACTGCCGATGAGGAGAGGGGTCAGGAGCATGCAGGGCATGTGCATGTCCACACACATGCCACACATGGCCATGCCCATGGCTCGGCCAGCCCCTCCGATGAGGAAAGCCTCTCCGACCTCATCAGACGCAGAATCGTCTCGCAAGTTTTGGAACTGGGAATTGTGGTTCATTCGGTGATAATTGGAGTCTCCTTAGGCGCCTCTCAAAGGCCAGAAACCATCAAGCCTCTCCTAGCAGCCCTGTCTTTCCATCAGTTTTTCGAGGGGCTGGGGCTTGGGGGCTGCATATCTCAGGCCAAATTCAGGTTCTCAACTATGGCCATGATGGTTCTTTTCTTCTCCGTCACAACCCCAGTGGGAATAGTGCTAGGCATTGGAATATCAAGAATTTACCACGAAAATGGCCCAACTGCACTCATAGTTGAAGGGGTATTTGACGCGGCATCGGCTGGGATCTTGATATACATGGCGCTGGTGGATCTTCTAGCGGCGGACTTCATGAACCCGAGGCTACAGAACAGCCTGAGGCTCCAGTTAGGGGCAAATATCTCCCTTCTTTTAGGGACTGGCTGCATGTCTTTCTTGGCCAAATGGGCTTGA 1083 0.5217 MATAPTLCITATNLLILLIFFLPSLVLSDCSCDEAEHSDHPINGGESLKYKLAAIASILVAGAAGVSIPLLGKKVPALNPENHIFFMIKAFAAGVILATGFIHILPEAFERLTSPCLGENPWGKFPFTGLVAMMSAIGTLMVDTFATGYYKRQHFSKPKQVTADEERGQEHAGHVHVHTHATHGHAHGSASPSDEESLSDLIRRRIVSQVLELGIVVHSVIIGVSLGASQRPETIKPLLAALSFHQFFEGLGLGGCISQAKFRFSTMAMMVLFFSVTTPVGIVLGIGISRIYHENGPTALIVEGVFDAASAGILIYMALVDLLAADFMNPRLQNSLRLQLGANISLLLGTGCMSFLAKWA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1398 360 Pfam ZIP Zinc transporter 49 357 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi19g1398 360 NCBIfam ZIP zinc/iron transport family 40 360 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vvi19g1398 360 PANTHER ZINC/IRON TRANSPORTER 47 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1398 Vvi-Chr19 23194285 23195624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1398 8 360 Inorganic Solute Cotransporters AT3G12750 61.157 2.21e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1398 K14709 - vvi:100263894 637.106