Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1381 ATGTTCTCTGTGCAGTGCATTAACCACAATGTGGAGACTGTTCTAGATCTCTCAGATGATATGCCAAAGTTAGTTCGAGGAGACTCCACTAGAGTTGTTCAAATATTTGCAAATCTAATCAGCAATTTTATCAAGTTTACAACATGTAAGTTCAGCTTTCCTATTGCTAAATGCAAGCTCTAG 183 0.3716 MFSVQCINHNVETVLDLSDDMPKLVRGDSTRVVQIFANLISNFIKFTTCKFSFPIAKCKL* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1381 60 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 47 IPR036890 -
Vvi19g1381 60 Gene3D - 1 56 IPR036890 -
Vvi19g1381 60 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1381 Vvi-Chr19 22972848 22973181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1381 1 48 Histidine Kinase Gene Family AT2G17820 91.667 2.08e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1381 - - twl:120013616 93.2041