Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1357 ATGAATTACTTGAAGGCAGTGGTGCTGGAGGCCTTGAGGAGGCATCCGCCGGGGCATTTTTCGATACCGAGATCGGTGACGGAGGACACCATTTTTGATGGGTACCTGATACCGAGAGATGCCTTGGTGAATTTCACAGTTGCAGACATGGGTTGGGACCCCAGTGTGTGGGAAGATCCGATGGAATTCAGGCCGGAGAGGTTCATGGTGGGTGAAGGTGGAGAGGTGGAGTTTGACGTAAAAGGGGTGAGGGAGATCAAGATGATGCCTTTTGGGGCAGGAAGGAGGGTTTGTCCTGCTATTTCCTTTGCATTGTTTCATATACAATACTTTGTGGCAAATTTGATTAGGGATTTCAAGTGGGTTGCTGAGGATGGAGGTGGGGTTGATTTGAGTGAGAAGAAAGATGGGTTCACCATTGAACTCAAGCATCCACTCAGGGCTCTAGTCTCTCCTAGAACAATTAGCTAA 471 0.4883 MNYLKAVVLEALRRHPPGHFSIPRSVTEDTIFDGYLIPRDALVNFTVADMGWDPSVWEDPMEFRPERFMVGEGGEVEFDVKGVREIKMMPFGAGRRVCPAISFALFHIQYFVANLIRDFKWVAEDGGGVDLSEKKDGFTIELKHPLRALVSPRTIS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1357 156 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 91 100 IPR017972 GO:0005506|GO:0016705
Vvi19g1357 156 Pfam Cytochrome P450 1 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 145 - -
Vvi19g1357 156 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 PRINTS E-class P450 group I signature 88 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 PRINTS E-class P450 group I signature 98 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 Gene3D Cytochrome P450 1 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1357 156 SUPERFAMILY Cytochrome P450 1 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1357 Vvi-Chr19 22672370 22672840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1357 1 153 Cytochrome P450 AT1G64940 57.516 4.05e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1357 K24184 - vvi:100258089 323.939