Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1353 ATGGCAGCAGCCCTTTTCGCCAGAACCCTTTTTGGAAATCGCTTGATTCGTTCCTCACTTGCCCTCTATCAGAAGCCTCAAATCTTCACCTCTTTTTTCAATAAGAGACCATTTTACTCACGGCCCAACGCTGTCTATTTGGTGTATAGAAGTTCTGGTTTTTCCACTTGTGCTATGGCTTCTTCAACTTCTGGGACAAGGTCTTCTTTTTCAACACAGTCTGTGTCTCCAAATGAACCTGTTGTTTCCGTTGATTGGCTCCATGCCAACATTAGGGAACCTGACTTGAAGGTGTTGGATGCGTCCTGGTACATGCCAGATGAGCAGAGAAATCCACTTCAGGAGTATCAGGTTGCCCACATTCCAGGTGCCCTTTTCTTTGATGTGGATGGCATATCAGATCAAACCACAAATTTGCCACACATGTTGCCATCGGAGGAAGCTTTTGCCGCTGCTGTTTCTGCCCTTGGTATTGAAAATAAAGATGGAGTTGTTGTTTATGACGGAAAGGGAATTTTCAGTGCAGCTCGGGTTTGGTGGATGTTCCGGGTATTTGGGCATGAGAGAATCTGGGTGTTGGATGGGGGCCTGCCAACATGGCGTGCATCAGGATTTGATGTAGAATCTAGTGCTTCTGGTGATGCTATTTTAAAAGCTAGTGCTGCCAGTGAGGCCATAGAGAAAGTATATCGCAGACAGGCAGTCGGGCCAATCACATTTCAGACAAGATTCCAGCCACATCTTGTCTGGACTCTTGAACAGGTTAATCAAAACATTGAGAACAAAACACACCAACACATAGATGCCAGATCAAAGGCCAGGTTTGATGGGATTGCACCAGAGCCTCGAAAGGGAATAAGAAGTGGACATGTCCCCAGCAGCAAGTGCATTCCCTTTTCCCAGATGTTGGATTCTTCACAAAAACTCTTACCTGCAGATGAGCTTAAGAAACGATTTGATCAAGAAGGCATCTCTTTGGACAGCCCCGTTGTGACTTCTTGTGGCACTGGTGTAACTGCTTGTATTCTCGCATTGGGTCTGCATCGTCTTGGGAAATCTGATGTTACTGTCTATGATGGCTCATGGACTGAATGGGGAGCTCACCCTGACACACCCGTCGCAACTTCTTCAGCTTCATCTTAA 1143 0.4619 MAAALFARTLFGNRLIRSSLALYQKPQIFTSFFNKRPFYSRPNAVYLVYRSSGFSTCAMASSTSGTRSSFSTQSVSPNEPVVSVDWLHANIREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHERIWVLDGGLPTWRASGFDVESSASGDAILKASAASEAIEKVYRRQAVGPITFQTRFQPHLVWTLEQVNQNIENKTHQHIDARSKARFDGIAPEPRKGIRSGHVPSSKCIPFSQMLDSSQKLLPADELKKRFDQEGISLDSPVVTSCGTGVTACILALGLHRLGKSDVTVYDGSWTEWGAHPDTPVATSSASS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1353 380 FunFam Sulfurtransferase 74 216 - -
Vvi19g1353 380 ProSitePatterns Rhodanese C-terminal signature. 355 365 IPR001307 GO:0004792
Vvi19g1353 380 Gene3D - 74 215 IPR036873 -
Vvi19g1353 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 79 210 IPR036873 -
Vvi19g1353 380 CDD TST_Repeat_2 251 367 - -
Vvi19g1353 380 ProSitePatterns Rhodanese signature 1. 116 127 IPR001307 GO:0004792
Vvi19g1353 380 PANTHER THIOSULFATE SULFERTANSFERASE 75 377 IPR045078 GO:0016783
Vvi19g1353 380 Coils Coil 252 272 - -
Vvi19g1353 380 Gene3D - 245 378 IPR036873 -
Vvi19g1353 380 ProSiteProfiles Rhodanese domain profile. 92 209 IPR001763 -
Vvi19g1353 380 Pfam Rhodanese-like domain 83 202 IPR001763 -
Vvi19g1353 380 Pfam Rhodanese-like domain 252 367 IPR001763 -
Vvi19g1353 380 FunFam Sulfurtransferase 245 376 - -
Vvi19g1353 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 253 376 IPR036873 -
Vvi19g1353 380 SMART rhod_4 82 206 IPR001763 -
Vvi19g1353 380 SMART rhod_4 250 371 IPR001763 -
Vvi19g1353 380 CDD TST_Repeat_1 81 204 - -
Vvi19g1353 380 ProSiteProfiles Rhodanese domain profile. 260 374 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1353 59 380 Sulfurtransferasese or Rhodanese AT1G79230 78.571 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1353 K01011 - vvi:100261543 758.444