Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1340 ATGATTTTTAAGGGCTTCTCAATCAACACAGACGCTAAGAAATCCACTACATTGGTGGGACATAGTGGATCTAGCAAATCAACCATCAATGGATTAATAAAAAGATTCTATGATCCCCTCAAAGGAATCGTAAAGTTGGATGGAAAAGATATAAAAATTTTCCACCTCAGGGTCCTACGGAAACACATTGCACTAGTACACCAAGAACCCATACTATTCGTAGCACCATAA 231 0.381 MIFKGFSINTDAKKSTTLVGHSGSSKSTINGLIKRFYDPLKGIVKLDGKDIKIFHLRVLRKHIALVHQEPILFVAP* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1340 76 Gene3D - 1 73 IPR027417 -
Vvi19g1340 76 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 73 IPR039421 -
Vvi19g1340 76 Pfam ABC transporter 4 73 IPR003439 GO:0005524
Vvi19g1340 76 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 73 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1340 Vvi-Chr19 22405382 22411727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1340 2 73 Calmodulin-binding Proteins AT2G36910 51.389 5.29e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1340 K05658 - vvi:100259876 117.472