Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1337 ATGTTCTTTGTGCAGTGCATTAACCACAATGTGGAGAATGTTCTAGATCTCTCAGATGATATGCCAAAGTTAGTTCGAGGAGACTTTGCTAGAGTTGTTCAAATATTTGCAAATCTAATCAGCAATTCTATCAAGTTTACAACATGTAAGTTCAGCTTTCCTATTGCTAAATGCAAGCTCTAG 183 0.3607 MFFVQCINHNVENVLDLSDDMPKLVRGDFARVVQIFANLISNSIKFTTCKFSFPIAKCKL* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1337 60 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 48 IPR036890 -
Vvi19g1337 60 Gene3D - 1 56 IPR036890 -
Vvi19g1337 60 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1337 Vvi-Chr19 22390588 22391529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1337 1 48 Histidine Kinase Gene Family AT2G17820 89.583 1.47e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1337 - - vri:117913039 90.5077