Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1329 ATGAAGAAGTTGATCCGCCGCTTGTCGAGAGTCTCCGATTCCTCACAGTACTGCCTCCTCCGATCCGACTCCCGATCCGCCACCCGCACCCGCCGCTCCGAGAGCTTCCGCACGGCCAAGCTCCGCCGTCCCCTCAGCGCCGGTGGAGTCCCCCACGGCCACCTCCCGGTCTACGTCGGAGAGGAGATGGAGCGGTTCATCGTGAGCGCCGAGTTTCTTAACCACCCGGTCTTCGTCAATCTGTTGAATAAATCGGCGCAGGAGTACGGGTACGAGCAGCAGGGCGTTCTGCGGATCCCTTGCCACGTCCTCGTCTTTGAGCGAGTCCTTGAAGCACTCCGGCTTGGCGACGAGTCGGGAGATTTGCAAGAGCTGGTGAACTCGGAGTGTCTCTGA 396 0.6162 MKKLIRRLSRVSDSSQYCLLRSDSRSATRTRRSESFRTAKLRRPLSAGGVPHGHLPVYVGEEMERFIVSAEFLNHPVFVNLLNKSAQEYGYEQQGVLRIPCHVLVFERVLEALRLGDESGDLQELVNSECL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1329 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 109 IPR003676 GO:0009733
Vvi19g1329 131 Pfam Auxin responsive protein 14 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1329 Vvi-Chr19 22279157 22279552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1329 41 130 Calmodulin-binding Proteins AT4G31320 40.860 1.89e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1329 K14488 - vvi:100258180 244.973