Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1324 ATGGCAAACAACGAGCTAAGGATCCCTCTGCAGACCCCAACGACTGGGTCATCGAGCTTCTTGAAGGCTTGCTTCAATGGCACAAATGCATTCCTAGGAATTGGGCTTCTGACTGTTCCTTATGCTCTCTCAAGTGGGGGGTGGCTGAGCTTGATCCTCTTCTTCTTGATCGCCATTATGACCTTCTACACCGGGATTTTACTAAAGCGGTGTATGGAGGCTGATCCATCCATTAGAAGCTACCTTGATATAGCAGAGCGAGCCTTTGGGATGAAGGGGAGGATCATAGTGATGATCATCATGAACTCTGAGCTCTACCTTGTTGCAATAGGGCTTTTGATACTGGAAGGGGACAACTTACATAAGCTATTTCCAAAGTTCATGATCAAGCTCGGGGAATTGACTGCGGATGGAAGACAGTCGTTCGTTTTGATCACTGCCCTCGTCATTTTCCCATCAATGTTGCTAACTGATTTGAGCATACTGTCCTATGTCTCGGCCACCGGTGTGTTTTCTTGCCTTATCATCCTCGTCTCCATTTTCTGCGTGGGTCTATTCAACGGCGTGGGGTTTCATGAAAAAGGAACACTTCTGAATGTCAAGAGCCTTCCTACTGGTGTTAGCTTGTATATCGTCTGCTTCGCGGGACATCCCGTTATCCCTTCCATATACACTTCAATGCGGAACACCTACCAGTTCAGTAAGGTTTTGTTGTTTAGTTTTGTCCTAACGACTTTCACCTACCTAGCAATGGCCATGGTGGGCTACCTTATGTATGGGGACAGCGTAGAATCACAAATAACTTTGAGCCTGCCAACCAGTAAAGTCTGCGCAGAGGTTGCAATATACACCACTTTACTTATTCCAATTACCCGATACGCATTGATGGTAACCCCAGTAGCGACTGCCATTGAAGGCGGGCTTTCAGAAAACTACAAGAATCAGAGAACTGTTAGATTACTCATAAGAGTAGGATTGCTGATTAGTACTGTTATCGTGGCCTATGTATTCCCATATTATGAGTCCCTAATGGCCATTGTTGGATCAATTTTTGTTGTTTCGGCTTCTTTTCTGCTCCCTTGCCTGTGCTACTTGAGGATTAATTCTGATTTGAGATGGGGTTGGAACTGTGAGCAGATGGGGATTGTGGGGATACTTGTATTTGGAACTCTTGCTGGGGTTTTAGGGACTTATTCATCTGTTTATGATCTTGTAACATGA 1221 0.4505 MANNELRIPLQTPTTGSSSFLKACFNGTNAFLGIGLLTVPYALSSGGWLSLILFFLIAIMTFYTGILLKRCMEADPSIRSYLDIAERAFGMKGRIIVMIIMNSELYLVAIGLLILEGDNLHKLFPKFMIKLGELTADGRQSFVLITALVIFPSMLLTDLSILSYVSATGVFSCLIILVSIFCVGLFNGVGFHEKGTLLNVKSLPTGVSLYIVCFAGHPVIPSIYTSMRNTYQFSKVLLFSFVLTTFTYLAMAMVGYLMYGDSVESQITLSLPTSKVCAEVAIYTTLLIPITRYALMVTPVATAIEGGLSENYKNQRTVRLLIRVGLLISTVIVAYVFPYYESLMAIVGSIFVVSASFLLPCLCYLRINSDLRWGWNCEQMGIVGILVFGTLAGVLGTYSSVYDLVT* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1324 406 PANTHER OS05G0424000 PROTEIN-RELATED 26 388 - -
Vvi19g1324 406 Pfam Transmembrane amino acid transporter protein 17 400 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1324 Vvi-Chr19 22163257 22164693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1324 4 405 Amino Acid or Auxin Permease AAAP Family AT3G28960 47.015 1.44e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1324 K15015 - vvi:100258085 792.727