Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1319 ATGGGCCTACTGAACGCTTCCTATGCTGCACGAGAAAATATATCTTCTTGTGACTCTCAAATTCCAACAGAGGAGACGAGAACTAGTTTACTTCTAAAGGAATTTTTTCAGAAGCATCGGAGTTCACGTATTGTGCTGCTGCTAGTCGTTCTCCTTGGCACAAGCATGGTTATTGGTGATGGAATCCTCACCCCAACAATGTCGGTCCTCTCTGCAGTTATTGGAATTAAAGTGCAGGTTAAGGAGTTGCATGAGAATCATGCTGTCATTATTGCCTGCGTTATCTTGGTGGGACTTTTTGCTCTTCAGCATTTTGGGACACACAAAGTTGGGTTTCTTTTCGCTCCAATTCTGATAGCTTGGCTGCTCTGCATCAGTGGCATAGGCATCTACAACATTATTCACTGGAATCCTCATGTTATCCGTGCTATATCACCACACTACATCTATAACTTTTTTAGGGAAACTGGAAAAGTTGGGTGGAGTTCGCTTGGTGCCATTGTTCTTTGCATTACAGGTGCTGAAGCTATGTTTGCTGATCTAGGCCATTTCTCCAAACTCTCAGTCAGGATTGCATTTACAGCCATTGTTTATCCTTGCTTAATTCTGGCATACATGGGTGAAGCTGCTTACTTGTCCCAAAACCGCACAGATGTTGAACATAGCTTCCACAAGGCTATCCCTAAGCTGATGTTTTGGCCAGTATTTATCATAGCAACTCTTGCAACTGTTGTGGGAAGCCAAGCAATAATTTCAGCTACCTTCTCGATTATTAGCCAGTGTAGGGCACTGAGATGCTTCCCACGGGTGAAAATAGTTCACACTTCAAGCCAAGTGCACGGACAAATTTACATACCAGAGGTGAACTGGATTTTGATGGGATTGTGTATTGCTGTTGCTATCGGTTTTAGAGACATTTCCATGATCGGCCATGCATATGGTCTTGCTGTGATCACTGTAATGTTTGTCACAACTTGTTTGATGTTTCTCATTATTAGTACGGTTTGGAAGCAAAACATTATGGCAGCATCCATGTTTATAGTCATATTTGGATCTGTGGAGCTACTGTATTTCTTGGCATGCATTGCTAAAGTGCAAAGAGGAGGCTGGCTTCCCATCCTCTTCTCTTTAGTCTTCATGTCTCTGATGTCTATCTGGCAGTATGGGACTTCAAAGAAACACCAATTTGAGCTAGAGAACAAGGTATGCTTGGAGAGCCTCTTCAGCCTTGGCCCAAGCCTAGGCATAAGTAGAGTTCCTGGAATAGGCCTAATTTATACCAATCTAGAGTCAGGGGTCCCTCCCATGTTTGCCCATTTTGTCACAAACTTTCCTGCTTTCCACCGGATCCTCATCTTTGTGACGCTCCAGTCATTGATGGTTCCAAAAGTTCCACCTGGTGAGCGTTTCCTTGTTAGCCGGATTGGCTCATCAGAGTTCTACTTGTATCACTGTGTTGTGAGATACGGATACAAGGATGTGAGGGACAGCTATGACTTTGAGACTAAGCTGATCGAGAAAGTGGCAGCATTCTTGCAAAGTGAAGAACTGGCAGTCACGGAGCAGCCGATGGAGAAAGCAGTGGCAACAGGAAATGGGGCTGGTGTTGGTTCTGGCAAGAGGAGAAAGGTGCAGTTCCAATGTGTGGAATTGAACGAGGAAGTGAAGGAACTCATGGAGGCAAGGGAATCTGGTGTGGCATACATGATTGGAAATCCATCTATAATTGCTAATGAGGTGTCATCCCCAGTGAAGAAGTTTGTCATCAACGTTGTCTATGGCTTTCTCCGACGTAATTGCCGCCTACCCGCCATTGCTCTTGGGATTCCACACACCTCCCTGGTTGAAGTGGGCATGGTCTATCATGTCTGA 1872 0.4471 MGLLNASYAARENISSCDSQIPTEETRTSLLLKEFFQKHRSSRIVLLLVVLLGTSMVIGDGILTPTMSVLSAVIGIKVQVKELHENHAVIIACVILVGLFALQHFGTHKVGFLFAPILIAWLLCISGIGIYNIIHWNPHVIRAISPHYIYNFFRETGKVGWSSLGAIVLCITGAEAMFADLGHFSKLSVRIAFTAIVYPCLILAYMGEAAYLSQNRTDVEHSFHKAIPKLMFWPVFIIATLATVVGSQAIISATFSIISQCRALRCFPRVKIVHTSSQVHGQIYIPEVNWILMGLCIAVAIGFRDISMIGHAYGLAVITVMFVTTCLMFLIISTVWKQNIMAASMFIVIFGSVELLYFLACIAKVQRGGWLPILFSLVFMSLMSIWQYGTSKKHQFELENKVCLESLFSLGPSLGISRVPGIGLIYTNLESGVPPMFAHFVTNFPAFHRILIFVTLQSLMVPKVPPGERFLVSRIGSSEFYLYHCVVRYGYKDVRDSYDFETKLIEKVAAFLQSEELAVTEQPMEKAVATGNGAGVGSGKRRKVQFQCVELNEEVKELMEARESGVAYMIGNPSIIANEVSSPVKKFVINVVYGFLRRNCRLPAIALGIPHTSLVEVGMVYHV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1319 623 Coils Coil 541 561 - -
Vvi19g1319 623 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 622 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1319 623 NCBIfam potassium uptake protein 21 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1319 623 Pfam K+ potassium transporter 32 493 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1319 Vvi-Chr19 22109679 22112851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1319 12 623 Inorganic Solute Cotransporters AT2G30070 57.259 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1319 K03549 - vvi:100259787 1219.53