Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1308 ATGGAAGAACAAGTGATGGAAATATTGGCCATAGGTGATGAAGAAATCCAGAAGATATGTCTCGGAACCTATTGTCCTAAAAACTGTGGCGCTAGCTACAAGCTTGGCAAGATGGTACTTGAAAAGATGGATGTTGTGACGGTAAAGAAGACGGAGGGCTCAAATTTCAGTGTAGTTGCTGAACCTTTGCCTGGTCCTCCCGTGATCGAGAGGCCTCTGGACAAGACTGTGGGCCAAGATTTGTTGTTTGGGAAGGTCTGGAAATGGCTCCAAGATGATGGAGAGCAGGTAAGCAGTATCGGATTATATGGAATGGGGGGTGTGGGCAAAACCACCCTCTTGACCAGGATCAACAATGAGCTCCTCAAAACCAGGCTTGAACTTGATGCAGTGATTTAG 399 0.4662 MEEQVMEILAIGDEEIQKICLGTYCPKNCGASYKLGKMVLEKMDVVTVKKTEGSNFSVVAEPLPGPPVIERPLDKTVGQDLLFGKVWKWLQDDGEQVSSIGLYGMGGVGKTTLLTRINNELLKTRLELDAVI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1308 132 Gene3D - 65 131 IPR027417 -
Vvi19g1308 132 Pfam NB-ARC domain 83 127 IPR002182 GO:0043531
Vvi19g1308 132 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 3 117 - -
Vvi19g1308 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 121 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1308 Vvi-Chr19 21981775 21982173 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g1308 - K13459 vvi:100249639 249.595